RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CATSPEREQ5SY80 951 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 LCTLQ6UWM7 567 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 SLCO4C1Q6ZQN7 724 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 SPATA19Q7Z5L4 167 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 C17orf64Q86WR6 236 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 LGI4Q8N135 537 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 EID3Q8N140 333 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 POU5F2Q8N7G0 328 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 RELL2Q8NC24 303 aaPredicted RBP10.62□□□□□ -0.71
NUP85-224ENST00000583948 ZUFSPQ96AP4 578 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 PTCD3Q96EY7 689 aaKnown RBP10.62□□□□□ -0.71
NUP85-224ENST00000583948 C1orf50Q9BV19 199 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 SLC6A16Q9GZN6 736 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 PCBD2Q9H0N5 130 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 LIN28AQ9H9Z2 209 aaKnown RBP10.62□□□□□ -0.71
NUP85-224ENST00000583948 ALKBH4Q9NXW9 302 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 TAGLN3Q9UI15 199 aa10.62□□□□□ -0.71
NUP85-224ENST00000583948 OR2A25A4D2G3 310 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 SGK494L7N484 410 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 B3GALT4O96024 378 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 ALDOCP09972 364 aaKnown RBP10.61□□□□□ -0.71
NUP85-224ENST00000583948 C1GALT1C1LP0DN25 315 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 EZRP15311 586 aaKnown RBP10.61□□□□□ -0.71
NUP85-224ENST00000583948 CD22P20273 847 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 ACVR2AP27037 513 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 NEK2P51955 445 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 NME5P56597 212 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 MXRA7P84157 204 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 SRSF2Q01130 221 aaKnown RBP10.61□□□□□ -0.71
NUP85-224ENST00000583948 HMGCS1Q01581 520 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 MEF2AQ02078 507 aaPredicted RBP10.61□□□□□ -0.71
NUP85-224ENST00000583948 RPS6KA2Q15349 733 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 HIST2H2ACQ16777 129 aaPredicted RBP10.61□□□□□ -0.71
NUP85-224ENST00000583948 FLYWCH1Q4VC44 716 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 PAGE2BQ5JRK9 111 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 FRG2Q64ET8 278 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 HIST2H2AA3Q6FI13 130 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 MED27Q6P2C8 311 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 NXPE4Q6UWF7 544 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 RPS19BP1Q86WX3 136 aaKnown RBP10.61□□□□□ -0.71
NUP85-224ENST00000583948 HOMEZQ8IX15 550 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 ULK2Q8IYT8 1036 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 FNDC5Q8NAU1 212 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 MAPK1IP1LQ8NDC0 245 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 REPS1Q96D71 796 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 PPP3R2Q96LZ3 170 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 FRG2BQ96QU4 278 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 EFCAB11Q9BUY7 163 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 ZNF385DQ9H6B1 395 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 MMP25Q9NPA2 562 aa10.61□□□□□ -0.71
NUP85-224ENST00000583948 NCKAP5O14513 1909 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 ARHGAP21Q5T5U3 1957 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 ZNF860A6NHJ4 632 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 A8MUA0 341 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 LSM1O15116 133 aaKnown RBP10.6□□□□□ -0.71
NUP85-224ENST00000583948 T-ENOLP0DO92 83 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 COX4I1P13073 169 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 IL1RNP18510 177 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 CALB2P22676 271 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 XCR1P46094 333 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 ATP4BP51164 291 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 AGFG1P52594 562 aaKnown RBP10.6□□□□□ -0.71
NUP85-224ENST00000583948 SLC26A5P58743 744 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 ERVK-8P63133 956 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 RPL38P63173 70 aaKnown RBP10.6□□□□□ -0.71
NUP85-224ENST00000583948 HYAL2Q12891 473 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 LAPTM5Q13571 262 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 NAA25Q14CX7 972 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 AP5B1Q2VPB7 878 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 AGKQ53H12 422 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 C10orf62Q5T681 223 aaPredicted RBP10.6□□□□□ -0.71
NUP85-224ENST00000583948 ICE2Q659A1 982 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 HMBOX1Q6NT76 420 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 GK5Q6ZS86 529 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 RNF165Q6ZSG1 346 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 Q6ZSR9 355 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 ADCK2Q7Z695 626 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 SNX32Q86XE0 403 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 MIER2Q8N344 545 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 RNF175Q8N4F7 328 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 NAXEQ8NCW5 288 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 OR5T3Q8NGG3 340 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 OR51Q1Q8NH59 317 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 M1APQ8TC57 530 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 SLC22A18Q96BI1 424 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 KLHL29Q96CT2 875 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 ACPTQ9BZG2 426 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 PELI2Q9HAT8 420 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 LRTM1Q9HBL6 345 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 MRGBPQ9NV56 204 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUP85-224ENST00000583948 CDC14AQ9UNH5 594 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 RRP15Q9Y3B9 282 aaKnown RBP10.6□□□□□ -0.71
NUP85-224ENST00000583948 POLR3HQ9Y535 204 aaPredicted RBP10.6□□□□□ -0.71
NUP85-224ENST00000583948 PCDHGA11Q9Y5H2 935 aa10.6□□□□□ -0.71
NUP85-224ENST00000583948 LOC100653049A0A140TA62 436 aa10.59□□□□□ -0.71
NUP85-224ENST00000583948 H0YIV9 168 aa10.59□□□□□ -0.71
NUP85-224ENST00000583948 PSMD12O00232 456 aaPredicted RBP10.59□□□□□ -0.71
NUP85-224ENST00000583948 HAT1O14929 419 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms