RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	MAX	P61244	160 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	SLC35A2	P78381	396 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	GCNT1	Q02742	428 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	DOC2A	Q14183	400 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ARMCX4	Q5H9R4	360 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	TTC19	Q6DKK2	380 aa	Predicted RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	CCDC70	Q6NSX1	233 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	AADACL2	Q6P093	401 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	LDB1	Q86U70	411 aa	Predicted RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	COMTD1	Q86VU5	262 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	IFT20	Q8IY31	132 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	GABRG1	Q8N1C3	465 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	PPM1K	Q8N3J5	372 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	CCDC185	Q8N715	623 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	FAM76A	Q8TAV0	307 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	SLC35G2	Q8TBE7	412 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ALG3	Q92685	438 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ITPKC	Q96DU7	683 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	HES6	Q96HZ4	224 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	AGPAT1	Q99943	283 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	DOHH	Q9BU89	302 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	TXLNGY	Q9BZA5	131 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	DDX47	Q9H0S4	455 aa	Known RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	PCDHAC1	Q9H158	963 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ISCU	Q9H1K1	167 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	MMP28	Q9H239	520 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	RABEP2	Q9H5N1	569 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	CNTD2	Q9H8S5	307 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	PCDH9	Q9HC56	1237 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	GP6	Q9HCN6	339 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	SMYD2	Q9NRG4	433 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	NPAP1	Q9NZP6	1156 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	CNOT11	Q9UKZ1	510 aa	Known RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	PCDHGC3	Q9UN70	934 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	CHKB	Q9Y259	395 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	TDRKH	Q9Y2W6	561 aa	Known RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	RRP15	Q9Y3B9	282 aa	Known RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF175	Q9Y473	711 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ANKRD65	E5RJM6	399 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	PGRMC1	O00264	195 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	WWP2	O00308	870 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	DAPK3	O43293	454 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	DEAF1	O75398	565 aa	Predicted RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	TSPAN9	O75954	239 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	MPZL1	O95297	269 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	KRT14	P02533	472 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	FH	P07954	510 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	CES1	P23141	567 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	JAK1	P23458	1154 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	PTAFR	P25105	342 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	PDHA2	P29803	388 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	HSD17B3	P37058	310 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	ATP4B	P51164	291 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	SLC37A1	P57057	533 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	GNGT1	P63211	74 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	EMX1	Q04741	257 aa	Predicted RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	HEPACAM	Q14CZ8	416 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	TCEAL1	Q15170	157 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	SF1	Q15637	639 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	BCL2A1	Q16548	175 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	MPEG1	Q2M385	716 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	SPRED3	Q2MJR0	410 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	CTU2	Q2VPK5	515 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	BBS9	Q3SYG4	887 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	RAB6C	Q53S08	254 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	PRAMEF20	Q5VT98	475 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	NAA35	Q5VZE5	725 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	ALKBH2	Q6NS38	261 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	SLC22A25	Q6T423	547 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	TMEM108	Q6UXF1	575 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772		Q6ZSV7	163 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	PEX26	Q7Z412	305 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	NOP9	Q86U38	636 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	CCDC25	Q86WR0	208 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	TEX26	Q8N6G2	289 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	SYT8	Q8NBV8	401 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	LPCAT1	Q8NF37	534 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	OR2L3	Q8NG85	312 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	OR2L8	Q8NGY9	312 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	OR2W6P	Q8NHA6	318 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	CENPI	Q92674	756 aa	Predicted RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	KRT35	Q92764	455 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	NCLN	Q969V3	563 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF653	Q96CK0	615 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	CALR3	Q96L12	384 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	OR2A5	Q96R48	311 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	GPR61	Q9BZJ8	451 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	POLR1E	Q9GZS1	481 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	RAB6C	Q9H0N0	254 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	RAB1B	Q9H0U4	201 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	TOR3A	Q9H497	397 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	TMBIM4	Q9HC24	238 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	MAGEE1	Q9HCI5	957 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	BPIFA1	Q9NP55	256 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	ACP6	Q9NPH0	428 aa		4.27	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms