RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	MOCS2	O96007	188 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	APOD	P05090	189 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	HMBS	P08397	361 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	RAB40AL	P0C0E4	278 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	FAM58BP	P0C7Q3	252 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ATP6V1B1	P15313	513 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PAX1	P15863	534 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	KDELR1	P24390	212 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	IL4R	P24394	825 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	MSN	P26038	577 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	HLA-F	P30511	346 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	TIA1	P31483	386 aa	Known RBP eCLIP	2.9	□□□□□ -1.95	4e-7	■■□□□ 13.4
MSI2-215	ENST00000582453	GABRA5	P31644	462 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	HSPA9	P38646	679 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CDKN1A	P38936	164 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CETN2	P41208	172 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	GLIPR1	P48060	266 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ARCN1	P48444	511 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CSNK1D	P48730	415 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	NR2C2	P49116	596 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CAPZA1	P52907	286 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CTSC	P53634	463 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	MLLT10	P55197	1068 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	RWDD2B	P57060	319 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	TPI1	P60174	286 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	KRTAP10-6	P60371	365 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SNRPE	P62304	92 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	RPS24	P62847	133 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	RPL24	P83731	157 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SCN1B	Q07699	218 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	MZT1	Q08AG7	82 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	C17orf67	Q0P5P2	114 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	HSPB3	Q12988	150 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ZNF177	Q13360	481 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CDH18	Q13634	790 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	TFDP2	Q14188	446 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	DPYSL3	Q14195	570 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	NFE2L1	Q14494	772 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PAFAH1B3	Q15102	231 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CDO1	Q16878	200 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ZNF674	Q2M3X9	581 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	EOGT	Q5NDL2	527 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	GRTP1	Q5TC63	336 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ALS2CL	Q60I27	953 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	BZW1	Q7L1Q6	419 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ADCK2	Q7Z695	626 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	KIAA1328	Q86T90	577 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	NT5DC3	Q86UY8	548 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ZSCAN30	Q86W11	494 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	MFN1	Q8IWA4	741 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	RCOR2	Q8IZ40	523 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	LGI2	Q8N0V4	545 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CARNMT1	Q8N4J0	409 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SPEM1	Q8N4L4	309 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SLC5A8	Q8N695	610 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	UBL4B	Q8N7F7	174 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	OR2AJ1	Q8NGZ0	328 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	OR52I2	Q8NH67	350 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	KIAA1524	Q8TCG1	905 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	GRK7	Q8WTQ7	553 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	DDI1	Q8WTU0	396 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	KCNE4	Q8WWG9	221 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ATL1	Q8WXF7	558 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	FAM131C	Q96AQ9	280 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PHF21A	Q96BD5	680 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SPSB1	Q96BD6	273 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SPDL1	Q96EA4	605 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SCRN2	Q96FV2	425 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	RMDN2	Q96LZ7	410 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	OLFM3	Q96PB7	478 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	TSGA13	Q96PP4	275 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CSPG4P5	Q96PW8	444 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	RNF157	Q96PX1	679 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PEBP4	Q96S96	227 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	EGFL8	Q99944	293 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SEMA3C	Q99985	751 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	FEM1A	Q9BSK4	669 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	FUT8	Q9BYC5	575 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	CARD9	Q9H257	536 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	LRMDA	Q9H2I8	198 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	DPAGT1	Q9H3H5	408 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	DHX35	Q9H5Z1	703 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SLA2	Q9H6Q3	261 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	LRRC19	Q9H756	370 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	COPS7B	Q9H9Q2	264 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PRMT8	Q9NR22	394 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	HEBP1	Q9NRV9	189 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	2.9	□□□□□ -1.95	6e-7	■■■■□ 23.9
MSI2-215	ENST00000582453	ABCB8	Q9NUT2	735 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	DNAJC17	Q9NVM6	304 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ELOVL2	Q9NXB9	296 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	THAP10	Q9P2Z0	257 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	XPO7	Q9UIA9	1087 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	GGA2	Q9UJY4	613 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	VANGL2	Q9ULK5	521 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	MMP17	Q9ULZ9	603 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PPP2R2C	Q9Y2T4	447 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ALG6	Q9Y672	507 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PTPRD	P23468	1912 aa		2.89	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms