RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZNF551Q7Z340 670 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF615Q8N8J6 731 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 OR56A1Q8NGH5 318 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 NUBPLQ8TB37 319 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 PPWD1Q96BP3 646 aaKnown RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 C8orf44Q96CB5 159 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 PANX1Q96RD7 426 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 TRIM4Q9C037 500 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 C3orf14Q9HBI5 128 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 ATP13A2Q9NQ11 1180 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 DDX18Q9NVP1 670 aaKnown RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 GIN1Q9NXP7 522 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 ARMCX1Q9P291 453 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 PRODH2Q9UF12 536 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 IGF2RP11717 2491 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 LOC400499M0QZD8 3231 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 TRBV5-3A0A0A0MS03 114 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CDC14CA4D256 554 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 C9JVG2 144 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 UPK1AO00322 258 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 NKX2-8O15522 239 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 EMC8O43402 210 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 KCNH1O95259 989 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 C6orf47O95873 294 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CBX7O95931 251 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CLPSP04118 112 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 ITGB2P05107 769 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 KRT16P08779 473 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CT62P0C5K7 136 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 UQCRC2P22695 453 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 GPC1P35052 558 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 MAP3K8P41279 467 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 MC3RP41968 323 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CDK9P50750 372 aaKnown RBP9.67□□□□□ -0.86
CCDC47-203ENST00000580986 DCAF7P61962 342 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF267Q14586 743 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-203ENST00000580986 MYBPC3Q14896 1274 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 EBPQ15125 230 aaKnown RBP9.67□□□□□ -0.86
CCDC47-203ENST00000580986 LTB4RQ15722 352 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 BTBD16Q32M84 506 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 VPS26BQ4G0F5 336 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 EXOSC6Q5RKV6 272 aaKnown RBP9.67□□□□□ -0.86
CCDC47-203ENST00000580986 FAM180BQ6P0A1 224 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 HSDL2Q6YN16 418 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 RNF111Q6ZNA4 994 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 DGAT2L6Q6ZPD8 337 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 GK5Q6ZS86 529 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 TRPM8Q7Z2W7 1104 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 TREML1Q86YW5 311 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 KBTBD2Q8IY47 623 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CLECL1Q8IZS7 167 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 FITM2Q8N6M3 262 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 PCYOX1LQ8NBM8 494 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 OR7G2Q8NG99 324 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 OR5L2Q8NGL0 311 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 OR4A15Q8NGL6 344 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 MIPOL1Q8TD10 442 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 NUDT8Q8WV74 236 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 TP53INP1Q96A56 240 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 VPS33AQ96AX1 596 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 ROPN1LQ96C74 230 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 FAM120BQ96EK7 910 aaKnown RBP9.67□□□□□ -0.86
CCDC47-203ENST00000580986 MS4A4EQ96PG1 132 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 MESP1Q9BRJ9 268 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CNPPD1Q9BV87 410 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 OR8D2Q9GZM6 311 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CXorf36Q9H7Y0 433 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 VPS4AQ9UN37 437 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 ERVK-11Q9UQG0 969 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 ERVK-19Q9WJR5 959 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 URB1O60287 2271 aaKnown RBP9.67□□□□□ -0.86
CCDC47-203ENST00000580986 ANKRD11Q6UB99 2663 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-203ENST00000580986 CHD8Q9HCK8 2581 aa9.67□□□□□ -0.86
CCDC47-203ENST00000580986 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 IGHV3-20A0A0C4DH32 117 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 CEACAM4O75871 244 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 ZFAND5O76080 213 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 COX4I1P13073 169 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 PPIBP23284 216 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 CCT3P49368 545 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 EMDP50402 254 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 MNAT1P51948 309 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 PGDP52209 483 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 MRPS35P82673 323 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 TRMT5Q32P41 509 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 TRMT12Q53H54 448 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 PAGE3Q5JUK9 113 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 SAXO2Q658L1 398 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 FAM111BQ6SJ93 734 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 TMEM107Q6UX40 140 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 DLEU7Q6UYE1 221 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 HACD2Q6Y1H2 254 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 SLC29A4Q7RTT9 530 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 GPR155Q7Z3F1 870 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 ANKRD46Q86W74 232 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 SNX32Q86XE0 403 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 SLC5A8Q8N695 610 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 CDRT4Q8N9R6 151 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 ADCY4Q8NFM4 1077 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 C16orf52Q8NHV5 167 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms