RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 A0A0G2JMM0 328 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 A0A1W2PPB8 328 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 A0A1W2PRS3 328 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 ANKRD33BA6NCL7 494 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 KIR3DP1A8MWS1 328 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 AQP7O14520 342 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 ZNF354AO60765 605 aaPredicted RBP18.53■□□□□ 0.56
SMG8-204ENST00000580498 IGHG3P01860 377 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 CT62P0C5K7 136 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 NAGAP17050 411 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 GALNT18Q6P9A2 607 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 C3P1Q6ZMU1 363 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 TRILQ7L0X0 811 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 C4orf33Q8N1A6 199 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 ZNF615Q8N8J6 731 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 C16orf78Q8WTQ4 265 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 EXOSC8Q96B26 276 aaKnown RBP18.53■□□□□ 0.56
SMG8-204ENST00000580498 SDCCAG3Q96C92 435 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 APIPQ96GX9 242 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 METTL2AQ96IZ6 378 aaKnown RBP18.53■□□□□ 0.56
SMG8-204ENST00000580498 LCORQ96JN0 433 aaPredicted RBP18.53■□□□□ 0.56
SMG8-204ENST00000580498 ROPN1BQ9BZX4 212 aaPredicted RBP18.53■□□□□ 0.56
SMG8-204ENST00000580498 METTL7AQ9H8H3 244 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 ROPN1Q9HAT0 212 aaPredicted RBP18.53■□□□□ 0.56
SMG8-204ENST00000580498 SH2D2AQ9NP31 389 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 MAT2BQ9NZL9 334 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 CHCHD2Q9Y6H1 151 aaPredicted RBP18.53■□□□□ 0.56
SMG8-204ENST00000580498 EML6Q6ZMW3 1958 aa18.53■□□□□ 0.56
SMG8-204ENST00000580498 SLC28A1O00337 649 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 RGS14O43566 566 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 RSL1D1O76021 490 aaKnown RBP18.52■□□□□ 0.56
SMG8-204ENST00000580498 SLITRK5O94991 958 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 SLU7O95391 586 aaKnown RBP18.52■□□□□ 0.56
SMG8-204ENST00000580498 HOXD4P09016 255 aaPredicted RBP18.52■□□□□ 0.56
SMG8-204ENST00000580498 NUDT17P0C025 328 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 DDX5P17844 614 aaKnown RBP18.52■□□□□ 0.56
SMG8-204ENST00000580498 GPX3P22352 226 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 GDF1P27539 372 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 NTSP30990 170 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 PTGER4P35408 488 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 HTR6P50406 440 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 PLCXD2Q0VAA5 305 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 SF3B4Q15427 424 aaKnown RBP eCLIP18.52■□□□□ 0.56
SMG8-204ENST00000580498 LYPD8Q6UX82 237 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 FAM9CQ8IZT9 166 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 ZNF441Q8N8Z8 693 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 OR52R1Q8NGF1 315 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 ZNF675Q8TD23 568 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 APOPT1Q96IL0 206 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 KCNA7Q96RP8 456 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 EBPLQ9BY08 206 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 STMN4Q9H169 189 aaPredicted RBP18.52■□□□□ 0.56
SMG8-204ENST00000580498 ANKZF1Q9H8Y5 726 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 EML4Q9HC35 981 aaKnown RBP18.52■□□□□ 0.56
SMG8-204ENST00000580498 SLC35C2Q9NQQ7 365 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 SIRT5Q9NXA8 310 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 PCNX1Q96RV3 2341 aa18.52■□□□□ 0.56
SMG8-204ENST00000580498 A0A1B0GVC2 190 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 TRIM13O60858 407 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 WDR1O75083 606 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 PPM1BO75688 479 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 CLPSP04118 112 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 NEFHP12036 1026 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 GABRA1P14867 456 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 CHN1P15882 459 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 ABCD3P28288 659 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 FBXW4P57775 412 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 MRPS22P82650 360 aaKnown RBP18.51■□□□□ 0.55
SMG8-204ENST00000580498 SLC18A2Q05940 514 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 C2orf80Q0P641 193 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 FOXO1Q12778 655 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 GXYLT1Q4G148 440 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 ZNF585AQ6P3V2 769 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 FAM111BQ6SJ93 734 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 SCIMPQ6UWF3 145 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 NUP54Q7Z3B4 507 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 CHERPQ8IWX8 916 aaKnown RBP18.51■□□□□ 0.55
SMG8-204ENST00000580498 CCDC116Q8IYX3 515 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 ADCY4Q8NFM4 1077 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 SPPL2AQ8TCT8 520 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 ADIPOR1Q96A54 375 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 CNRIP1Q96F85 164 aaPredicted RBP18.51■□□□□ 0.55
SMG8-204ENST00000580498 DMRTA2Q96SC8 542 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 ZNF703Q9H7S9 590 aaPredicted RBP18.51■□□□□ 0.55
SMG8-204ENST00000580498 MKS1Q9NXB0 559 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 CNOT11Q9UKZ1 510 aaKnown RBP18.51■□□□□ 0.55
SMG8-204ENST00000580498 DNAJC13O75165 2243 aa18.51■□□□□ 0.55
SMG8-204ENST00000580498 NCOA6Q14686 2063 aaPredicted RBP18.5■□□□□ 0.55
SMG8-204ENST00000580498 CACNA1DQ01668 2161 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 A0A1W2PS29 197 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 ABCB7O75027 752 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 COQ9O75208 318 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 TRAPPC6AO75865 159 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 DDCP20711 480 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 ELAVL4P26378 380 aaKnown RBP18.5■□□□□ 0.55
SMG8-204ENST00000580498 ACVR2AP27037 513 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 VSNL1P62760 191 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 EXOSC7Q15024 291 aaKnown RBP18.5■□□□□ 0.55
SMG8-204ENST00000580498 TOMM20Q15388 145 aa18.5■□□□□ 0.55
SMG8-204ENST00000580498 SH2D5Q6ZV89 423 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms