RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 VPS33AQ96AX1 596 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 EXOSC8Q96B26 276 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ROPN1LQ96C74 230 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ELP4Q96EB1 424 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SLC45A3Q96JT2 553 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 IP6K3Q96PC2 410 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 BBS4Q96RK4 519 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CRB3Q9BUF7 120 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 PAIP1Q9H074 479 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 EFCAB1Q9HAE3 211 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CXorf21Q9HAI6 301 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ADAP2Q9NPF8 381 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SIRT3Q9NTG7 399 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 RYDENQ9NUL5 291 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ARL8BQ9NVJ2 186 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 PTGFRNQ9P2B2 879 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 TAGLN3Q9UI15 199 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ENTPD4Q9Y227 616 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CCDC88CQ9P219 2028 aa10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 RP1L1Q8IWN7 2480 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-204ENST00000577664 MED13LQ71F56 2210 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 A0A096LPI6 279 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 A0A1W2PS29 197 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 OR2W5A6NFC9 320 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 HNRNPCL1O60812 293 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CDC123O75794 336 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ATP5HO75947 161 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SOX30O94993 753 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 PSMG1O95456 288 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 IGKV3-11P04433 115 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 C8orf89P0DMQ9 161 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CALB2P22676 271 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 NTSP30990 170 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 FEN1P39748 380 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 FOLR3P41439 243 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 PLIN5Q00G26 463 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 KCNAB2Q13303 367 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ZNF750Q32MQ0 723 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 MINDY4Q4G0A6 757 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 TIGD2Q4W5G0 525 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 AP1ARQ63HQ0 302 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CPEB2Q7Z5Q1 589 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 YTHDF3Q7Z739 585 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SNX32Q86XE0 403 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 MORN4Q8NDC4 146 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 NFAM1Q8NET5 270 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 OR7G1Q8NGA0 311 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CDC26Q8NHZ8 85 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 METTL21AQ8WXB1 218 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 DAZLQ92904 295 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 MOAP1Q96BY2 351 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 IMMP1LQ96LU5 166 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 DGAT2Q96PD7 388 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 WDR77Q9BQA1 342 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 GPATCH1Q9BRR8 931 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ZNF700Q9H0M5 742 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SOX17Q9H6I2 414 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 EPS8L2Q9H6S3 715 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 MAT2BQ9NZL9 334 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 C19orf25Q9UFG5 118 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 PCDHGB4Q9UN71 923 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 C19orf53Q9UNZ5 99 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 PTRH2Q9Y3E5 179 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 HS3ST3B1Q9Y662 390 aa10.38□□□□□ -0.75
CDK5RAP3-204ENST00000577664 C9JVG2 144 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 NR5A2O00482 541 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 EBAG9O00559 213 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SOCS6O14544 535 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 RFXANKO14593 260 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ANGPT2O15123 496 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CREG1O75629 220 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 KCNH1O95259 989 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 DDAH2O95865 285 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 C6orf47O95873 294 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ABCB1P08183 1280 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 UQCRC2P22695 453 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 MAP3K8P41279 467 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 NCBP2P52298 156 aaKnown RBP eCLIP10.37□□□□□ -0.756e-7■■■■□ 23.5
CDK5RAP3-204ENST00000577664 TXNL4AP83876 142 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 TGIF1Q15583 401 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 RUNDC3AQ59EK9 446 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 EXOSC6Q5RKV6 272 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ZCCHC12Q6PEW1 402 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SLC2A7Q6PXP3 512 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 KIRREL2Q6UWL6 708 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 DGAT2L6Q6ZPD8 337 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ZNF551Q7Z340 670 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 TMEM151BQ8IW70 566 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 CLECL1Q8IZS7 167 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 IL22RA1Q8N6P7 574 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 TRIML2Q8N7C3 387 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 ZSCAN1Q8NBB4 408 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 OR8K3Q8NH51 312 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 OR14A16Q8NHC5 309 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 MIPOL1Q8TD10 442 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 SFXN5Q8TD22 340 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 RIT1Q92963 219 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 TSLPQ969D9 159 aa10.37□□□□□ -0.75
CDK5RAP3-204ENST00000577664 KIAA1143Q96AT1 154 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms