RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 OPN3Q9H1Y3 402 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 OR10A5Q9H207 317 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 METTL7AQ9H8H3 244 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CNOT10Q9H9A5 744 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CAB39LQ9H9S4 337 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CXorf21Q9HAI6 301 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 GALNT9Q9HCQ5 603 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CD274Q9NZQ7 290 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CLCF1Q9UBD9 225 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 PTBP2Q9UKA9 531 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 ASB4Q9Y574 426 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 SVEP1Q4LDE5 3571 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 PLOD2O00469 737 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 PLPP1O14494 284 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 PGRMC2O15173 223 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 TMPRSS11DO60235 418 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 EEDO75530 441 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 CBR3O75828 277 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 CCDC166P0CW27 439 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 CD1DP15813 335 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 TCEA1P23193 301 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 GALNSP34059 522 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 GCKP35557 465 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 UGT2B10P36537 528 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 BUD31P41223 144 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 LHX2P50458 406 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 RAP1GDS1P52306 607 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 GFRA1P56159 465 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 NRG3P56975 720 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 RPP38P78345 283 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 FUT7Q11130 342 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 E2F2Q14209 437 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 PPP1R7Q15435 360 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 NNATQ16517 81 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 HEPHL1Q6MZM0 1159 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 PODNL1Q6PEZ8 512 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 P4HA3Q7Z4N8 544 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 GRAMD2AQ8IUY3 354 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 ZCCHC7Q8N3Z6 543 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 HUS1BQ8NHY5 278 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 IGFBPL1Q8WX77 278 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 HGDQ93099 445 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 UBE2E3Q969T4 207 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 TRIM44Q96DX7 344 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 MTERF1Q99551 399 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 PELOQ9BRX2 385 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 CD244Q9BZW8 370 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 DERL2Q9GZP9 239 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 NXF5Q9H1B4 397 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 ACBD3Q9H3P7 528 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 RYDENQ9NUL5 291 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 EHD3Q9NZN3 535 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 HEY2Q9UBP5 337 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 PHF11Q9UIL8 331 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 EXO1Q9UQ84 846 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 DTX4Q9Y2E6 619 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 MTO1Q9Y2Z2 717 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 TEX264Q9Y6I9 313 aa9.16□□□□□ -0.94
NPLOC4-220ENST00000576940 RAI1Q7Z5J4 1906 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 C16orf97H3BN30 126 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 PHGDHO43175 533 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 PPM1BO75688 479 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 SOX30O94993 753 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 WISP3O95389 354 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 AIFM1O95831 613 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 PLAUP00749 431 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 GBAP04062 536 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 POU2F1P14859 743 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 PAX1P15863 534 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 EPB42P16452 691 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 KRT15P19012 456 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 S1PR1P21453 382 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 CHMP24386 653 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 CCKARP32238 428 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 BSGP35613 385 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 GMPRP36959 345 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 KIR2DL2P43627 348 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 KCNJ5P48544 419 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 TMED10P49755 219 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 ATP5J2P56134 94 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 CLDN18P56856 261 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 EEF1A1P68104 462 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 SIRPAP78324 504 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 MGAT5Q09328 741 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 EEF1A1P5Q5VTE0 462 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 STEAP4Q687X5 459 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 MRM1Q6IN84 353 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 SLC30A6Q6NXT4 461 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 NUP54Q7Z3B4 507 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 IFNEQ86WN2 208 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 GALNT12Q8IXK2 581 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 MEIOBQ8N635 442 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF610Q8N9Z0 462 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 TRIM58Q8NG06 486 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 TMEM171Q8WVE6 324 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 EXT2Q93063 718 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 OSBPL11Q9BXB4 747 aa9.15□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF717Q9BY31 904 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms