RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 C3P1Q6ZMU1 363 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 CLDN22Q8N7P3 220 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SUN3Q8TAQ9 357 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 RIT1Q92963 219 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 CSNK1G1Q9HCP0 422 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 PTTG3PQ9NZH4 202 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SCP2D1Q9UJQ7 156 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 EDARQ9UNE0 448 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC22A31A6NKX4 558 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 KCNK5O95279 499 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 GPR4P46093 362 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 SOX2P48431 317 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 LEXMQ3ZCV2 418 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR8S1Q8NH09 359 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 LCN9Q8WX39 176 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 NUS1Q96E22 293 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 YIPF6Q96EC8 236 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 C17orf62Q9BQA9 187 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 CDADC1Q9BWV3 514 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC28A3Q9HAS3 691 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 FKBP14Q9NWM8 211 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 GLS2Q9UI32 602 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 NDRG4Q9ULP0 352 aaKnown RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 J3KTA2 159 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 RTCAO00442 366 aaKnown RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 SOX30O94993 753 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 PVALBP20472 110 aaPredicted RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 HTR2AP28223 471 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 GDI2P50395 445 aaKnown RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 CEBPGP53567 150 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ACTC1P68032 377 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ACTA1P68133 377 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 KLHL26Q53HC5 615 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 METTL11BQ5VVY1 283 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 FAM180BQ6P0A1 224 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 GET4Q7L5D6 327 aaPredicted RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 IQCF2Q8IXL9 164 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF566Q969W8 418 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 DEC1Q9P2X7 70 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 PLAGL1Q9UM63 463 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ECM29Q5VYK3 1845 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 CARNS1A5YM72 827 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 M0R3H8 397 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 UGDHO60701 494 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF623O75123 536 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 GTF2F2P13984 249 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ENDOUP21128 410 aaKnown RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 GIFP27352 417 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 TAP2Q03519 686 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR2G6Q5TZ20 316 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 XAF1Q6GPH4 301 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ATCAYQ86WG3 371 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 BEST4Q8NFU0 473 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR51A7Q8NH64 312 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 FAM46AQ96IP4 442 aaKnown RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF436Q9C0F3 470 aaPredicted RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 CXCL16Q9H2A7 254 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 TXNL4BQ9NX01 149 aaKnown RBP12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 OSGIN1Q9UJX0 560 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 PCDHGA6Q9Y5G7 932 aa12.48□□□□□ -0.41
PCDHGB3-201ENST00000576222 C13orf42A0A1B0GVH6 325 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 H7BY64 318 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 MEN1O00255 615 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 ADH1CP00326 375 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 HTR1AP08908 422 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 CD3GP09693 182 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 RPS19P39019 145 aaKnown RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 CAP1Q01518 475 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 ELP2Q6IA86 826 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 PCNPQ8WW12 178 aaKnown RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 CIDECQ96AQ7 238 aaPredicted RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 PRAP1Q96NZ9 151 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 F2RL3Q96RI0 385 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 SH2B3Q9UQQ2 575 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 COLEC10Q9Y6Z7 277 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 DOCK2Q92608 1830 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 H3BSH0 61 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 NDUFS4O43181 175 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC43A1O75387 559 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 RLN2P04090 185 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 LRRC32Q14392 662 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 PLBD1Q6P4A8 553 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR52P1PQ8NH57 321 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 RBM18Q96H35 190 aaKnown RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 NECTIN4Q96NY8 510 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 NEDD4LQ96PU5 975 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 XKR8Q9H6D3 395 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 IL20RAQ9UHF4 553 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 MAST2Q6P0Q8 1798 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 LOC100509620A0A075B734 347 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 B3GALT2O43825 422 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 STC2O76061 302 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC16A8O95907 504 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 TPGS2Q68CL5 300 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms