RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 C16orf52Q8NHV5 167 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 EXOSC8Q96B26 276 aaKnown RBP13.42□□□□□ -0.26
LITAF-208ENST00000571627 SPACA9Q96E40 222 aaPredicted RBP13.42□□□□□ -0.26
LITAF-208ENST00000571627 ZNF681Q96N22 645 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 CCT7Q99832 543 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 OR10A5Q9H207 317 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 PFDN4Q9NQP4 134 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 SACM1LQ9NTJ5 587 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 MAT2BQ9NZL9 334 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 ZNF835Q9Y2P0 537 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 WDR91A4D1P6 747 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 SEC22BO75396 215 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 PDE9AO76083 593 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 P04436 131 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 ATP1B1P05026 303 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 ABOP16442 354 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 CNR1P21554 472 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 SOX18P35713 384 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 MAGOHP61326 146 aaKnown RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 PPIAP62937 165 aaKnown RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 MRPS35P82673 323 aaKnown RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 ZNF763Q0D2J5 394 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 MPP2Q14168 576 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 CHI3L2Q15782 390 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 NNATQ16517 81 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.41□□□□□ -0.26
LITAF-208ENST00000571627 AGBL2Q5U5Z8 902 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 HLA-DQA1Q5Y7H0 255 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 C3P1Q6ZMU1 363 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 NCCRP1Q6ZVX7 275 aaPredicted RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 HDXQ7Z353 690 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 PRR22Q8IZ63 422 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 SAMD14Q8IZD0 417 aaPredicted RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 KIRREL3Q8IZU9 778 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 LRRC25Q8N386 305 aaPredicted RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 SLC15A4Q8N697 577 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 OR10G3Q8NGC4 313 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 TWIST2Q8WVJ9 160 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 TLCD1Q96CP7 247 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 CCDC120Q96HB5 630 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 SGCZQ96LD1 299 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 FAM173AQ9BQD7 235 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 TTTY12Q9BZ98 90 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 DEFB127Q9H1M4 99 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 LRTM1Q9HBL6 345 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 SH2D2AQ9NP31 389 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 RYDENQ9NUL5 291 aaKnown RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 C1orf109Q9NX04 203 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 TUBA8Q9NY65 449 aaPredicted RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 BCAP29Q9UHQ4 241 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 CCL27Q9Y4X3 112 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 POLR3HQ9Y535 204 aaPredicted RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 DNAJC15Q9Y5T4 150 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 ZNF780BQ9Y6R6 833 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 CELSR2Q9HCU4 2923 aa13.41□□□□□ -0.26
LITAF-208ENST00000571627 NCOA6Q14686 2063 aaPredicted RBP13.41□□□□□ -0.26
LITAF-208ENST00000571627 FREM3P0C091 2139 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 A0A1B0GTH9 108 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 TMEM120BA0PK00 339 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 TMEM233B4DJY2 109 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 ACOT7O00154 380 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 GLSO94925 669 aaPredicted RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 HSPA4LO95757 839 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 CBX7O95931 251 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 PCSK2P16519 638 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 GPX3P22352 226 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 CASP6P55212 293 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 ABCE1P61221 599 aaKnown RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 UGT3A2Q3SY77 523 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 TRMT12Q53H54 448 aaKnown RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 SLC22A10Q63ZE4 541 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 Q6ZPB1 254 aaPredicted RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 GK5Q6ZS86 529 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 DDIASQ8IXT1 998 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 TAGAPQ8N103 731 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 ANKRD42Q8N9B4 389 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 OR7G1Q8NGA0 311 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 ADIPOR1Q96A54 375 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 PAIP2Q9BPZ3 127 aaKnown RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 ITPAQ9BY32 194 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 TUBB1Q9H4B7 451 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 ANKRA2Q9H9E1 313 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 GIMAP4Q9NUV9 329 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 NKIRAS1Q9NYS0 192 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 EHD3Q9NZN3 535 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 SUCOQ9UBS9 1254 aaKnown RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 ZNF639Q9UID6 485 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 TMED5Q9Y3A6 229 aa13.4□□□□□ -0.26
LITAF-208ENST00000571627 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
LITAF-208ENST00000571627 NME6O75414 186 aaPredicted RBP13.39□□□□□ -0.27
LITAF-208ENST00000571627 CELA3AP09093 270 aa13.39□□□□□ -0.27
LITAF-208ENST00000571627 LINC00032P0C843 101 aa13.39□□□□□ -0.27
LITAF-208ENST00000571627 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
LITAF-208ENST00000571627 ARRB2P32121 409 aa13.39□□□□□ -0.27
LITAF-208ENST00000571627 MAGEA5P43359 124 aa13.39□□□□□ -0.27
LITAF-208ENST00000571627 FBXW4P57775 412 aa13.39□□□□□ -0.27
LITAF-208ENST00000571627 KCNJ2P63252 427 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms