RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ASF1BQ9NVP2 202 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 ASIC5Q9NY37 505 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 ATP6V1HQ9UI12 483 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 G3BP2Q9UN86 482 aaKnown RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 TMED5Q9Y3A6 229 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 HRH3Q9Y5N1 445 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 ZNF780BQ9Y6R6 833 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 NINQ8N4C6 2090 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 DYTNA2CJ06 578 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 TTLL8A6PVC2 850 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 G3V3Y1 287 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 UPK1AO00322 258 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 HDAC3O15379 428 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 ZNHIT1O43257 154 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 PRAMEF2O60811 474 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 SCN2BO60939 215 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 PSMG1O95456 288 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 CCL3P10147 92 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 LBPP18428 481 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 MST1P26927 711 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 GSTM5P46439 218 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 ZFP36L2P47974 494 aaKnown RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 UQCRFS1P47985 274 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 HLCSP50747 726 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 NME5P56597 212 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 CLDN8P56748 225 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 CORO7P57737 925 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 GPR85P60893 370 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 UFM1P61960 85 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 AP2B1P63010 937 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 OC90Q02509 493 aaPredicted RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 HSPB3Q12988 150 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 BIKQ13323 160 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 TLR1Q15399 786 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 INPP5JQ15735 1006 aaPredicted RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 LSM12Q3MHD2 195 aaKnown RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 ZNF766Q5HY98 468 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 RNFT1Q5M7Z0 435 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 ZNF324BQ6AW86 544 aaPredicted RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 OGFOD2Q6N063 350 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 CGB2Q6NT52 195 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 EPGNQ6UW88 154 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 IL20RBQ6UXL0 311 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 GALNTL5Q7Z4T8 443 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 HPS6Q86YV9 775 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 TRIM42Q8IWZ5 723 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 FAM9CQ8IZT9 166 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 CLEC4FQ8N1N0 589 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 GOLGA6L1Q8N7Z2 621 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 OR4N2Q8NGD1 307 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 PIWIL2Q8TC59 973 aaKnown RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 CPT1CQ8TCG5 803 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 LRRC8CQ8TDW0 803 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 MIB2Q96AX9 1013 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 PPCDCQ96CD2 204 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 COQ8BQ96D53 544 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 ELP4Q96EB1 424 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 GIMAP5Q96F15 307 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 ZNF764Q96H86 408 aaPredicted RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 MAGED4Q96JG8 741 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 MAGEB18Q96M61 343 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 BBS4Q96RK4 519 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 BARD1Q99728 777 aaKnown RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 UTP23Q9BRU9 249 aaKnown RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 PROK2Q9HC23 129 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 SH2D2AQ9NP31 389 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 AIG1Q9NVV5 245 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 SH3BP4Q9P0V3 963 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 LRFN1Q9P244 771 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 COPS7AQ9UBW8 275 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 BCAP29Q9UHQ4 241 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 PSME2Q9UL46 239 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 ENTPD4Q9Y227 616 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 WBP11Q9Y2W2 641 aaKnown RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 YARS2Q9Y2Z4 477 aaKnown RBP6.45□□□□□ -1.38
SMG6-209ENST00000571442 GPR45Q9Y5Y3 372 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 USH1CQ9Y6N9 552 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 SVILO95425 2214 aa6.45□□□□□ -1.38
SMG6-209ENST00000571442 ZGRF1Q86YA3 2104 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 COL12A1Q99715 3063 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 PCNX3Q9H6A9 2034 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 TRAV17A0A0B4J275 112 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 C2orf92A0A1B0GVN3 265 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 SYNDIG1LA6NDD5 238 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 OR6C76A6NM76 312 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 C17orf51A8MQB3 221 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 B4DXG7 233 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 TCP11X1B4DZS4 312 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 PLOD2O00469 737 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 ADAM10O14672 748 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 PDPK1O15530 556 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 NME2P1O60361 137 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 PLOD3O60568 738 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 KLHL41O60662 606 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 EDF1O60869 148 aaKnown RBP6.44□□□□□ -1.38
SMG6-209ENST00000571442 SLC25A12O75746 678 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 SNUPNO95149 360 aaKnown RBP6.44□□□□□ -1.38
SMG6-209ENST00000571442 C6orf47O95873 294 aa6.44□□□□□ -1.38
SMG6-209ENST00000571442 SP1P08047 785 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms