RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 WWP2O00308 870 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 AK4P27144 223 aaPredicted RBP8.28□□□□□ -1.08
LINC00558-201ENST00000569422 CERS1P27544 350 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 BCL6P41182 706 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 KCNC4Q03721 635 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 ADAMTSL4Q6UY14 1074 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 IKBIPQ70UQ0 350 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 OR52E1Q8NGJ3 308 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 OR6Q1Q8NGQ2 317 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 CHPT1Q8WUD6 406 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 WDR12Q9GZL7 423 aaKnown RBP8.28□□□□□ -1.08
LINC00558-201ENST00000569422 SLIRPQ9GZT3 109 aaKnown RBP8.28□□□□□ -1.08
LINC00558-201ENST00000569422 POLR2J3Q9H1A7 115 aaKnown RBP8.28□□□□□ -1.08
LINC00558-201ENST00000569422 DSN1Q9H410 356 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 CRLF2Q9HC73 371 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 AKIP1Q9NQ31 210 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 THSD1Q9NS62 852 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 CLN6Q9NWW5 311 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF624Q9P2J8 865 aaPredicted RBP8.28□□□□□ -1.08
LINC00558-201ENST00000569422 THAP10Q9P2Z0 257 aaPredicted RBP8.28□□□□□ -1.08
LINC00558-201ENST00000569422 CLEC2DQ9UHP7 191 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 ATG4BQ9Y4P1 393 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 KCNE3Q9Y6H6 103 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 DOCK9Q9BZ29 2069 aa8.28□□□□□ -1.08
LINC00558-201ENST00000569422 HTR3EA5X5Y0 456 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 H0Y8X5 98 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 TLR4O00206 839 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 KPNA4O00629 521 aaPredicted RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 HAT1O14929 419 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 LINC01565O15544 149 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 PLOD3O60568 738 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 H1F0P07305 194 aaKnown RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ACVR2AP27037 513 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 GRK3P35626 688 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 SOX3P41225 446 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 PRDX1Q06830 199 aaKnown RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 DBPQ10586 325 aaPredicted RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 LRRC32Q14392 662 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 SAXO2Q658L1 398 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 PARM1Q6UWI2 310 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 SLC22A16Q86VW1 577 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 OR4N5Q8IXE1 308 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 RAB42Q8N4Z0 105 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 OR2A1Q8NGT9 310 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 SLC7A13Q8TCU3 470 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 KAT2AQ92830 837 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 HDAC8Q9BY41 377 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 UCK2Q9BZX2 261 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 PHPT1Q9NRX4 125 aaPredicted RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ZMIZ1Q9ULJ6 1067 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 CFL2Q9Y281 166 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 KIAA1671Q9BY89 1806 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 RGS5O15539 181 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 TLX2O43763 284 aaPredicted RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 UGT2B17O75795 530 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 HMGN2P05204 90 aaKnown RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 RPLP0P05388 317 aaKnown RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF3P17036 446 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 DDX5P17844 614 aaKnown RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 CBLP22681 906 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ELAVL4P26378 380 aaKnown RBP8.27□□□□□ -1.09
LINC00558-201ENST00000569422 PRKAR1BP31321 381 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 XKP51811 444 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ARHGDIBP52566 201 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 RELAQ04206 551 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 UBE3AQ05086 875 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 MXD1Q05195 221 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 DUSP2Q05923 314 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 RPA4Q13156 261 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 DOC2BQ14184 412 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 SLC9A5Q14940 896 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF404Q494X3 552 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 UBE2UQ5VVX9 321 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 PAQR6Q6TCH4 344 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 CASP12Q6UXS9 341 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 FGF14Q92915 247 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 TMEM203Q969S6 136 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ZG16BQ96DA0 208 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 QRFPRQ96P65 431 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF607Q96SK3 696 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 MGLLQ99685 303 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 MENTQ9BUN1 341 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 FNDC11Q9BVV2 318 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 AICDAQ9GZX7 198 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 SLC35C2Q9NQQ7 365 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 SACM1LQ9NTJ5 587 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 IL20RAQ9UHF4 553 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 IFT52Q9Y366 437 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 CKAP5Q14008 2032 aa8.27□□□□□ -1.09
LINC00558-201ENST00000569422 LRIT2A6NDA9 550 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 HNRNPCL2B2RXH8 293 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 YKT6O15498 198 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CYP7B1O75881 506 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 APODP05090 189 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ALOX12P18054 663 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 RGS6P49758 472 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 RAB28P51157 221 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 UGT2B15P54855 530 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PCBP4P57723 403 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms