RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DEFB126Q9BYW3 111 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 NMUR2Q9GZQ4 415 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 ING2Q9H160 280 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 NEUROD4Q9HD90 331 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 MMP25Q9NPA2 562 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 DDX18Q9NVP1 670 aaKnown RBP14.93□□□□□ -0.02
USB1-215ENST00000569252 TAS2R9Q9NYW1 312 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 PTGFRNQ9P2B2 879 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 PRODH2Q9UF12 536 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 TEKT2Q9UIF3 430 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 BTNL2Q9UIR0 455 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 NDUFAF1Q9Y375 327 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 NUP210LQ5VU65 1888 aa14.93□□□□□ -0.02
USB1-215ENST00000569252 A0A1W2PS29 197 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 A8MUI8 341 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 C9JVG2 144 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 PLOD2O00469 737 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 RFXANKO14593 260 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 COQ9O75208 318 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 C6orf47O95873 294 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 SERPINA7P05543 415 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 EFNA1P20827 205 aaPredicted RBP14.92□□□□□ -0.02
USB1-215ENST00000569252 FRKP42685 505 aaPredicted RBP14.92□□□□□ -0.02
USB1-215ENST00000569252 CCL11P51671 97 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 PRKAG1P54619 331 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 KLF10Q13118 480 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 PRSS53Q2L4Q9 553 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 VPS26BQ4G0F5 336 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 TIGD2Q4W5G0 525 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 C6orf10Q5SRN2 563 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 CPZQ66K79 652 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 BORAQ6PGQ7 559 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 ZNF621Q6ZSS3 439 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 DOK4Q8TEW6 326 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 NUDT8Q8WV74 236 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 MOAP1Q96BY2 351 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 CMTM5Q96DZ9 223 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 ELP4Q96EB1 424 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 THOC3Q96J01 351 aaKnown RBP14.92□□□□□ -0.02
USB1-215ENST00000569252 WDR77Q9BQA1 342 aaPredicted RBP14.92□□□□□ -0.02
USB1-215ENST00000569252 SLC25A23Q9BV35 468 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 LHPPQ9H008 270 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 SLC25A18Q9H1K4 315 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 OR10A5Q9H207 317 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 CCDC88CQ9P219 2028 aa14.92□□□□□ -0.02
USB1-215ENST00000569252 NOTCH2Q04721 2471 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 A0A087WV62 115 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 A0A1W2PP18 115 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 A6NL46 340 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 OR6C76A6NM76 312 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 EMC8O43402 210 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 PLOD3O60568 738 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 PRAMEF2O60811 474 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 SOAT1P35610 550 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 CCT3P49368 545 aaKnown RBP14.91□□□□□ -0.02
USB1-215ENST00000569252 POLE2P56282 527 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 CYLC2Q14093 348 aaPredicted RBP14.91□□□□□ -0.02
USB1-215ENST00000569252 RCAN2Q14206 197 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 LTB4RQ15722 352 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 MPEG1Q2M385 716 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 TRMT12Q53H54 448 aaKnown RBP14.91□□□□□ -0.02
USB1-215ENST00000569252 ZNF628Q5EBL2 1059 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 FAM111BQ6SJ93 734 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 DGAT2L6Q6ZPD8 337 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 ANKRD46Q86W74 232 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 GALNT16Q8N428 558 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 NFAM1Q8NET5 270 aaPredicted RBP14.91□□□□□ -0.02
USB1-215ENST00000569252 SUN3Q8TAQ9 357 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 VPS33AQ96AX1 596 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 MESP1Q9BRJ9 268 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 ZNF385DQ9H6B1 395 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 MAT2BQ9NZL9 334 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 ARMCX1Q9P291 453 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 LEF1Q9UJU2 399 aaPredicted RBP14.91□□□□□ -0.02
USB1-215ENST00000569252 VPS4AQ9UN37 437 aa14.91□□□□□ -0.02
USB1-215ENST00000569252 TRBV11-1A0A0K0K1C0 115 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 LOC100653049A0A140TA62 436 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 KRT34O76011 436 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 DDAH2O95865 285 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 IFI6P09912 130 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 CHI3L1P36222 383 aaPredicted RBP14.9□□□□□ -0.02
USB1-215ENST00000569252 MC3RP41968 323 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 TRPC1P48995 793 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 WNT3P56703 355 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 HBA1P69905 142 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 MRPS35P82673 323 aaKnown RBP14.9□□□□□ -0.02
USB1-215ENST00000569252 CBX1P83916 185 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 DUSP2Q05923 314 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 FUT7Q11130 342 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 KCNAB2Q13303 367 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 TP53BP2Q13625 1128 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 ZNHIT3Q15649 155 aaPredicted RBP14.9□□□□□ -0.02
USB1-215ENST00000569252 GK5Q6ZS86 529 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 FUNDC1Q8IVP5 155 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 APLFQ8IW19 511 aaPredicted RBP14.9□□□□□ -0.02
USB1-215ENST00000569252 CLECL1Q8IZS7 167 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 SLC5A8Q8N695 610 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 PCYOX1LQ8NBM8 494 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 NUP43Q8NFH3 380 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 OR52R1Q8NGF1 315 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms