RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 SMIM10Q96HG1 83 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 Q96MT0 163 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 COL21A1Q96P44 957 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 TRNT1Q96Q11 434 aaKnown RBP16.64■□□□□ 0.25
NEIL1-221ENST00000569035 ZFYVE21Q9BQ24 234 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 EVA1AQ9H8M9 152 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 NECTIN3Q9NQS3 549 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 ENPP5Q9UJA9 477 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 FBXO4Q9UKT5 387 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 FBXW2Q9UKT8 454 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 KNL1Q8NG31 2342 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 LAMA1P25391 3075 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 BCL10O95999 233 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 UGT2B7P16662 529 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 IFNGR2P38484 337 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 BTN3A2P78410 334 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 WDR45BQ5MNZ6 344 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 FIGLAQ6QHK4 219 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 SZRD1Q7Z422 152 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 OOSP2Q86WS3 158 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 CCL4L1Q8NHW4 92 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 FAM81AQ8TBF8 368 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 UTP15Q8TED0 518 aaKnown RBP16.64■□□□□ 0.25
NEIL1-221ENST00000569035 GAB3Q8WWW8 586 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 PMM1Q92871 262 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 CNRIP1Q96F85 164 aaPredicted RBP16.64■□□□□ 0.25
NEIL1-221ENST00000569035 OR2A5Q96R48 311 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 NRTNQ99748 197 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 DGCR6LQ9BY27 220 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 ACTRT3Q9BYD9 372 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 TCEAL2Q9H3H9 227 aaPredicted RBP16.64■□□□□ 0.25
NEIL1-221ENST00000569035 ANKRD19PQ9H560 264 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 PLGRKTQ9HBL7 147 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 PTGFRNQ9P2B2 879 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 SLC13A4Q9UKG4 626 aa16.64■□□□□ 0.25
NEIL1-221ENST00000569035 A0A1W2PRQ8 180 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 TLR4O00206 839 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 UGT2B17O75795 530 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 CPN2P22792 545 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 CERS1P27544 350 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 FMO3P31513 532 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 UGT2B15P54855 530 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 SKP1P63208 163 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 ALDH6A1Q02252 535 aaKnown RBP16.63■□□□□ 0.25
NEIL1-221ENST00000569035 NFATC3Q12968 1075 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 DGCR6Q14129 220 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 PUM1Q14671 1186 aaKnown RBP eCLIP16.63■□□□□ 0.25
NEIL1-221ENST00000569035 VN1R4Q7Z5H5 301 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 LRRC25Q8N386 305 aaPredicted RBP16.63■□□□□ 0.25
NEIL1-221ENST00000569035 AMER3Q8N944 861 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 TOR1AIP2Q8NFQ8 470 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 OR4K14Q8NGD5 310 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 FAR1Q8WVX9 515 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 RAB8BQ92930 207 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 ELP4Q96EB1 424 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 CRELD1Q96HD1 420 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 ZNF681Q96N22 645 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 NMNAT1Q9HAN9 279 aaPredicted RBP16.63■□□□□ 0.25
NEIL1-221ENST00000569035 KLHL28Q9NXS3 571 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 CNOT2Q9NZN8 540 aaKnown RBP16.63■□□□□ 0.25
NEIL1-221ENST00000569035 C5AR2Q9P296 337 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 RNF6Q9Y252 685 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 PCDHGA10Q9Y5H3 936 aa16.63■□□□□ 0.25
NEIL1-221ENST00000569035 A0A0G2JN53 185 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 A0A0J9YY10 115 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 PRAMEF25A6NGN4 478 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 CLCA1A8K7I4 914 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 PCDHGA12O60330 932 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 HMGN2P05204 90 aaKnown RBP16.62■□□□□ 0.25
NEIL1-221ENST00000569035 OSMP13725 252 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 GSTM3P21266 225 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 DHPSP49366 369 aaPredicted RBP16.62■□□□□ 0.25
NEIL1-221ENST00000569035 CSNK1EP49674 416 aaKnown RBP16.62■□□□□ 0.25
NEIL1-221ENST00000569035 CRISP1P54107 249 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 RAB15P59190 212 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 RPS26P62854 115 aaKnown RBP16.62■□□□□ 0.25
NEIL1-221ENST00000569035 OLR1P78380 273 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 ILKQ13418 452 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 TBCEQ15813 527 aaPredicted RBP16.62■□□□□ 0.25
NEIL1-221ENST00000569035 TCTN3Q6NUS6 607 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 FBXO42Q6P3S6 717 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 ZCCHC12Q6PEW1 402 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 KLHL35Q6PF15 583 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 CD300LDQ6UXZ3 194 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 CCDC116Q8IYX3 515 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 NUP43Q8NFH3 380 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 GPR32P1Q8NGA4 272 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 OR52J3Q8NH60 311 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 FLVCR1-AS1Q8TAF5 88 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 SIGLEC11Q96RL6 698 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 UCK2Q9BZX2 261 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 CPNE7Q9UBL6 633 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 PSORS1C1Q9UIG5 152 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 IFT52Q9Y366 437 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 CCDC88CQ9P219 2028 aa16.62■□□□□ 0.25
NEIL1-221ENST00000569035 EFCAB10A6NFE3 127 aa16.61■□□□□ 0.25
NEIL1-221ENST00000569035 ZAR1LA6NP61 321 aa16.61■□□□□ 0.25
NEIL1-221ENST00000569035 PGRMC2O15173 223 aa16.61■□□□□ 0.25
NEIL1-221ENST00000569035 XPNPEP2O43895 674 aa16.61■□□□□ 0.25
NEIL1-221ENST00000569035 B4GALT2O60909 372 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms