RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	TMEM64	Q6YI46	380 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	RNF165	Q6ZSG1	346 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	CCDC116	Q8IYX3	515 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	ARFGAP2	Q8N6H7	521 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	DNAJB8	Q8NHS0	232 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	SUN3	Q8TAQ9	357 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	LRRC8C	Q8TDW0	803 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	ADAMTS18	Q8TE60	1221 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	DYDC1	Q8WWB3	177 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	KAT2A	Q92830	837 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	C14orf79	Q96F83	325 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	MAGEB18	Q96M61	343 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	ROGDI	Q9GZN7	287 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	MEAF6	Q9HAF1	191 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	CLK4	Q9HAZ1	481 aa	Known RBP	7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	FAM53C	Q9NYF3	392 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	PHF11	Q9UIL8	331 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	ABCA4	P78363	2273 aa		7.76	□□□□□ -1.17
TSC2-223	ENST00000568566	INTS1	Q8N201	2190 aa	Known RBP	7.76	□□□□□ -1.17
TSC2-223	ENST00000568566		A0A088AWK7	358 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566		A0A1W2PQ72	361 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	OR5H15	A6NDH6	313 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566		A8MUI8	341 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	C17orf105	B2RV13	164 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	POLR3G	O15318	223 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	HDAC3	O15379	428 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNHIT1	O43257	154 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	EDF1	O60869	148 aa	Known RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	LAMP1	P11279	417 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	CPM	P14384	443 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ALOX15	P16050	662 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	PCSK2	P16519	638 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	TNNI3	P19429	210 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF10	P21506	573 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	JAK1	P23458	1154 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	MDH1	P40925	334 aa	Known RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZFP36L2	P47974	494 aa	Known RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ART1	P52961	327 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ARFIP1	P53367	373 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	UFM1	P61960	85 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	MRPS35	P82673	323 aa	Known RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	EMX2	Q04743	252 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	STX4	Q12846	297 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF267	Q14586	743 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	LSM12	Q3MHD2	195 aa	Known RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	SPIN4	Q56A73	249 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF766	Q5HY98	468 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	C10orf62	Q5T681	223 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ABHD17B	Q5VST6	288 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	NXN	Q6DKJ4	435 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	DESI1	Q6ICB0	168 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	EPGN	Q6UW88	154 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	MEX3B	Q6ZN04	569 aa	Known RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	PAGE2	Q7Z2X7	111 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF551	Q7Z340	670 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	WDR53	Q7Z5U6	358 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	LSR	Q86X29	649 aa	Predicted RBP	7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	RIMKLA	Q8IXN7	391 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	CLEC4F	Q8N1N0	589 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	FNDC5	Q8NAU1	212 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	APCDD1L	Q8NCL9	501 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	OR4K14	Q8NGD5	310 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	OR9A2	Q8NGT5	310 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	RAB3IL1	Q8TBN0	382 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF721	Q8TF20	911 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	METTL21A	Q8WXB1	218 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	NCLN	Q969V3	563 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	C7orf26	Q96N11	449 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	SPOCK3	Q9BQ16	436 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	CENPK	Q9BS16	269 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	OR8D2	Q9GZM6	311 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	RNF32	Q9H0A6	362 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	MYNN	Q9NPC7	610 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	FGFR1OP2	Q9NVK5	253 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	RIC8B	Q9NVN3	520 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	NMRK1	Q9NWW6	199 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	VTI1B	Q9UEU0	232 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	DCTN4	Q9UJW0	460 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	DTX4	Q9Y2E6	619 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	MEMO1	Q9Y316	297 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	MMACHC	Q9Y4U1	282 aa		7.75	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF469	Q96JG9	3925 aa	Predicted RBP	7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	TRBV11-1	A0A0K0K1C0	115 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	C1orf226	A1L170	272 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	SAGE2P	A6NJ88	616 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	MYO1G	B0I1T2	1018 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	NPIPA5	E9PKD4	350 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	CLDN4	O14493	209 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	CHEK2	O96017	543 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	HOXB4	P17483	251 aa	Predicted RBP	7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	LBP	P18428	481 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	DDC	P20711	480 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	NT5E	P21589	574 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	IL10	P22301	178 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	STT3A	P46977	705 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	CDK9	P50750	372 aa	Known RBP	7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	DGKQ	P52824	942 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	AQP5	P55064	265 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	WNT3	P56703	355 aa		7.74	□□□□□ -1.17
TSC2-223	ENST00000568566	TRA2B	P62995	288 aa	Known RBP	7.74	□□□□□ -1.17

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