RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 CHAC2Q8WUX2 184 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 RNF31Q96EP0 1072 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 DNAJA3Q96EY1 480 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 IRF2BPLQ9H1B7 796 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 KLHL31Q9H511 634 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 FZD3Q9NPG1 666 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SLC9A8Q9Y2E8 581 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 NOTOA8MTQ0 251 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 HMGN4O00479 90 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PGRMC2O15173 223 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 NARSO43776 548 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 LCMT2O60294 686 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PIP5K1CO60331 668 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SEMA3DO95025 777 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CRYBB2P43320 205 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ERVFC1P60507 584 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CDC20Q12834 499 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CCNJQ5T5M9 372 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CNIH2Q6PI25 160 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CCDC80Q76M96 950 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 TMC8Q8IU68 726 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 TMEFF1Q8IYR6 380 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 UBQLNLQ8IYU4 475 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 TM9SF4Q92544 642 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 C12orf66Q96MD2 445 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF607Q96SK3 696 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 DPH7Q9BTV6 452 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 OR51V1Q9H2C8 321 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SERHL2Q9H4I8 314 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PTGFRNQ9P2B2 879 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 V9GYH0 126 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 TBC1D3BA6NDS4 549 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 MAGEB4O15481 346 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ARHGEF15O94989 841 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SCG5P05408 212 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CSF3P09919 207 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF30P17039 623 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 HTR2BP41595 481 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PSPHP78330 225 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SYT14P1Q58G82 188 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 NDUFAF5Q5TEU4 345 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 C18orf63Q68DL7 685 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 Q8N402 240 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 TMEM145Q8NBT3 493 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SIMC1Q8NDZ2 872 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 C9orf43Q8TAL5 461 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PIGKQ92643 395 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ARRDC3Q96B67 414 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 KCTD7Q96MP8 289 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CDCP1Q9H5V8 836 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 NKIRAS2Q9NYR9 191 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 WSB2Q9NYS7 404 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF624Q9P2J8 865 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 HSPB11Q9Y547 144 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PCM1Q15154 2024 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SCN2AQ99250 2005 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CACNA1CQ13936 2221 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 PRAMEF27A3QJZ7 478 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 PITPNM1O00562 1244 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 NDUFS4O43181 175 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 UGDHO60701 494 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 KLHL18O94889 574 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 LALBAP00709 142 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 HMGN2P05204 90 aaKnown RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 SYPP08247 313 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 EPCAMP16422 314 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 PTX3P26022 381 aaPredicted RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 MMP12P39900 470 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 CDH11P55287 796 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 BTBD16Q32M84 506 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 KHDRBS2Q5VWX1 349 aaKnown RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 METTL2BQ6P1Q9 378 aaKnown RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 TUBA3EQ6PEY2 450 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 FAM92BQ6ZTR7 304 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 GPR155Q7Z3F1 870 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 ADGRD2Q7Z7M1 963 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 SYT9Q86SS6 491 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 SHISA5Q8N114 240 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 CHCHD4Q8N4Q1 142 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 LILRB4Q8NHJ6 448 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 TIFAQ96CG3 184 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 FRMD6Q96NE9 622 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 SLC22A4Q9H015 551 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 C6orf106Q9H6K1 298 aaPredicted RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 GALNT9Q9HCQ5 603 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 PLCXD1Q9NUJ7 323 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 AHSPQ9NZD4 102 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 MRPL15Q9P015 296 aaKnown RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 SEC14L4Q9UDX3 406 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 HCN2Q9UL51 889 aa8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 ZFR2Q9UPR6 939 aaKnown RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 GPR55Q9Y2T6 319 aaPredicted RBP8.46□□□□□ -1.05
HDGFL3-206ENST00000568294 PRRT4C9JH25 899 aa8.46□□□□□ -1.06
HDGFL3-206ENST00000568294 CAPN5O15484 640 aaPredicted RBP8.46□□□□□ -1.06
HDGFL3-206ENST00000568294 REM1O75628 298 aa8.46□□□□□ -1.06
HDGFL3-206ENST00000568294 RAB36O95755 333 aa8.46□□□□□ -1.06
HDGFL3-206ENST00000568294 PAK4O96013 591 aaPredicted RBP8.46□□□□□ -1.06
HDGFL3-206ENST00000568294 EIF2S1P05198 315 aaKnown RBP8.46□□□□□ -1.06
HDGFL3-206ENST00000568294 DDCP20711 480 aa8.46□□□□□ -1.06
HDGFL3-206ENST00000568294 CPN2P22792 545 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms