RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SIM2Q14190 667 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 PRTGQ2VWP7 1150 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SLC36A3Q495N2 470 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 MFSD4BQ5TF39 518 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SHQ1Q6PI26 577 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 DEF8Q6ZN54 512 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CARM1Q86X55 608 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ZNF786Q8N393 782 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 TMEM105Q8N8V8 129 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SLC16A11Q8NCK7 471 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ZNF555Q8NEP9 628 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 NUDT22Q9BRQ3 303 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 GTPBP2Q9BX10 602 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 ACTRT3Q9BYD9 372 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ANKRD60Q9BZ19 345 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 DHCR7Q9UBM7 475 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 EPHA6Q9UF33 1036 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PADI2Q9Y2J8 665 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 DPPA5A6NC42 116 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 ADAMDEC1O15204 470 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 FOXS1O43638 330 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 MITFO75030 526 aaPredicted RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 JRKO75564 520 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMG1-215ENST00000568239 MFN2O95140 757 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TNFAIP8O95379 198 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CHRM4P08173 479 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 RNH1P13489 461 aaKnown RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 FPR1P21462 350 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CSF2RBP32927 897 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 OR1D4P47884 311 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 RXRGP48443 463 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 GPLD1P80108 840 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TXNL4AP83876 142 aaKnown RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 PPP2R2BQ00005 443 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CFHR1Q03591 330 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 GRM7Q14831 915 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 EXOSC7Q15024 291 aaKnown RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 MAPK11Q15759 364 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TCTE1Q5JU00 501 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 MLIPQ5VWP3 458 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 GUSBP11Q6P575 273 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TTC33Q6PID6 262 aaPredicted RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 C11orf74Q86VG3 221 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 GPR135Q8IZ08 494 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 EID2Q8N6I1 236 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TANKQ92844 425 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CDS1Q92903 461 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 RBM18Q96H35 190 aaKnown RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 MUS81Q96NY9 551 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 MS4A4EQ96PG1 132 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 ZNF300Q96RE9 604 aaPredicted RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 CD180Q99467 661 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 DUSP23Q9BVJ7 150 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 NPLQ9BXD5 320 aaPredicted RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 AMBRA1Q9C0C7 1298 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 ING2Q9H160 280 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 RIBC2Q9H4K1 309 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 C3orf18Q9UK00 162 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 MKLN1Q9UL63 735 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 MRPS33Q9Y291 106 aaKnown RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 PCDHGB3Q9Y5G1 929 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 A0A1B0GTQ1 180 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TMEM221A6NGB7 291 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 PRAMEF25A6NGN4 478 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 M0R296 226 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CLDN4O14493 209 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 SIGLEC6O43699 453 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 PCDHGA12O60330 932 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TDGF1P13385 188 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CD1CP29017 333 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 POLR2IP36954 125 aaKnown RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 GPR3P46089 330 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 RAD23AP54725 363 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 BTG2P78543 158 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CHRNEQ04844 493 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 FUT5Q11128 374 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 KCNAB2Q13303 367 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 GNA13Q14344 377 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 PIWIL3Q7Z3Z3 882 aaKnown RBP6.62□□□□□ -1.35
SMG1-215ENST00000568239 TAGAPQ8N103 731 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 RCBTB1Q8NDN9 531 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 OR51Q1Q8NH59 317 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 ZNF347Q96SE7 839 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 SLC7A5P2Q9GIP4 190 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 CTPS2Q9NRF8 586 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 PRTFDC1Q9NRG1 225 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 PNPLA3Q9NST1 481 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 EXD2Q9NVH0 621 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 NLGN3Q9NZ94 848 aa6.62□□□□□ -1.35
SMG1-215ENST00000568239 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 DUXAA6NLW8 204 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 M0R3H8 397 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 TPST2O60704 377 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 BMP10O95393 424 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 NSA2O95478 260 aaKnown RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 HPRP00739 348 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 IFNA16P05015 189 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 CT62P0C5K7 136 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms