RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 PIK3CGP48736 1102 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 GTF2H2Q13888 395 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 EBPQ15125 230 aaKnown RBP8.44□□□□□ -1.06
CDH13-210ENST00000567445 PCBP2Q15366 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDH13-210ENST00000567445 NTRK2Q16620 822 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 SLC25A35Q3KQZ1 300 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 TM4SF20Q53R12 229 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 GTF2H2CQ6P1K8 395 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 METTL2BQ6P1Q9 378 aaKnown RBP8.44□□□□□ -1.06
CDH13-210ENST00000567445 KLC3Q6P597 504 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 GOLGA7Q7Z5G4 137 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 TMEM200AQ86VY9 491 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 NUDT13Q86X67 352 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 THNSL2Q86YJ6 484 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 LIX1LQ8IVB5 337 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 TAGAPQ8N103 731 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 L3MBTL4Q8NA19 623 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 NEIL3Q8TAT5 605 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 WDR20Q8TBZ3 569 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 DOK4Q8TEW6 326 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 JSRP1Q96MG2 331 aaPredicted RBP8.44□□□□□ -1.06
CDH13-210ENST00000567445 DOHHQ9BU89 302 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 ACKR4Q9NPB9 350 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 SNX15Q9NRS6 342 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 ALKBH4Q9NXW9 302 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 CNOT11Q9UKZ1 510 aaKnown RBP8.44□□□□□ -1.06
CDH13-210ENST00000567445 PCDHGB3Q9Y5G1 929 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 TNPO3Q9Y5L0 923 aaKnown RBP8.44□□□□□ -1.06
CDH13-210ENST00000567445 NCKAP5O14513 1909 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 A0A096LPK6 155 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 TP53I11O14683 189 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 SEMA3DO95025 777 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 ZWINTO95229 277 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 LRATO95237 230 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 AIFM1O95831 613 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 CLPSP04118 112 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 FREM3P0C091 2139 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 CD1EP15812 388 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 TYK2P29597 1187 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 CASQ1P31415 396 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 NEK2P51955 445 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 DLX5P56178 289 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 RIPPLY2Q5TAB7 128 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 OR52E8Q6IFG1 317 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 WDR53Q7Z5U6 358 aaPredicted RBP8.43□□□□□ -1.06
CDH13-210ENST00000567445 ULK2Q8IYT8 1036 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 LIX1Q8N485 282 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 ZNF441Q8N8Z8 693 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 TP53INP1Q96A56 240 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 GPR78Q96P69 363 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 SERPINI1Q99574 410 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 SLC6A15Q9H2J7 730 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 CXorf21Q9HAI6 301 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 CPSF2Q9P2I0 782 aaKnown RBP8.43□□□□□ -1.06
CDH13-210ENST00000567445 RNF11Q9Y3C5 154 aa8.43□□□□□ -1.06
CDH13-210ENST00000567445 ARHGAP21Q5T5U3 1957 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 C2orf92A0A1B0GVN3 265 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 HSPB2A8KAH6 182 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 CAPN14A8MX76 684 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 PGRMC2O15173 223 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 TRIM3O75382 744 aaPredicted RBP8.42□□□□□ -1.06
CDH13-210ENST00000567445 FBXO24O75426 580 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 SIX3O95343 332 aaPredicted RBP8.42□□□□□ -1.06
CDH13-210ENST00000567445 CLDN9O95484 217 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 GBAP04062 536 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 ALDOAP04075 364 aaKnown RBP8.42□□□□□ -1.06
CDH13-210ENST00000567445 GDF1P27539 372 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 PIK3R1P27986 724 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 SSTR4P31391 388 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 TRPC1P48995 793 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 SERPINB8P50452 374 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 FBXW4P57775 412 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 RPS6KA2Q15349 733 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 HSPB2Q16082 182 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 UAP1Q16222 522 aaPredicted RBP8.42□□□□□ -1.06
CDH13-210ENST00000567445 HLA-DQA1Q5Y7H0 255 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 TMEM198Q66K66 360 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 ARSKQ6UWY0 536 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 ZNF572Q7Z3I7 529 aaPredicted RBP8.42□□□□□ -1.06
CDH13-210ENST00000567445 DIO2Q92813 273 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 UCN3Q969E3 161 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 ZNF597Q96LX8 424 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 NOL11Q9H8H0 719 aaKnown RBP8.42□□□□□ -1.06
CDH13-210ENST00000567445 TEX10Q9NXF1 929 aaPredicted RBP8.42□□□□□ -1.06
CDH13-210ENST00000567445 MCM8Q9UJA3 840 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 L3MBTL1Q9Y468 752 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 NPFFR2Q9Y5X5 522 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 ITPR3Q14573 2671 aa8.42□□□□□ -1.06
CDH13-210ENST00000567445 C15orf38-AP3S2A0A0A6YYH1 394 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 A0A1W2PS29 197 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 AHRRA9YTQ3 701 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 OR7A17O14581 309 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 SNX4O95219 450 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 PHBP35232 272 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 ARL1P40616 181 aaPredicted RBP8.41□□□□□ -1.06
CDH13-210ENST00000567445 PEX19P40855 299 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 TMED10P49755 219 aaKnown RBP8.41□□□□□ -1.06
CDH13-210ENST00000567445 CCNG1P51959 295 aa8.41□□□□□ -1.06
CDH13-210ENST00000567445 ART1P52961 327 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms