RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 MPEG1Q2M385 716 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 PGS1Q32NB8 556 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 FAM111BQ6SJ93 734 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 OPN5Q6U736 354 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 TMEM107Q6UX40 140 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 SZRD1Q7Z422 152 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 TAGAPQ8N103 731 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 MIER2Q8N344 545 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 SLC15A4Q8N697 577 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF615Q8N8J6 731 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 TEX19Q8NA77 164 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 OR52R1Q8NGF1 315 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 C16orf52Q8NHV5 167 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 ASB15Q8WXK1 588 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 HAS2Q92819 552 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 TP53INP1Q96A56 240 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 PNPLA2Q96AD5 504 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 MOAP1Q96BY2 351 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.29□□□□□ -0.6
SF3B3-208ENST00000567250 RABEP2Q9H5N1 569 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 C3orf14Q9HBI5 128 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 SDR39U1Q9NRG7 319 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-208ENST00000567250 FAM120CQ9NX05 1096 aaKnown RBP11.29□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF639Q9UID6 485 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 ANAPC2Q9UJX6 822 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 PCDHGB4Q9UN71 923 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 TRAV17A0A0B4J275 112 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 TTC36A6NLP5 189 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 A8MVJ9 347 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 CAPN14A8MX76 684 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 WWP2O00308 870 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 RNASET2O00584 256 aaKnown RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 ANKRD28O15084 1053 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 CFLARO15519 480 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 PRKNO60260 465 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 SLC22A3O75751 556 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 OR2J2O76002 312 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 WDPCPO95876 746 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 CBX7O95931 251 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 CLPSP04118 112 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 LAMP1P11279 417 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 GPX3P22352 226 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 S100A3P33764 101 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 PTGER1P34995 402 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 CYB561P49447 251 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 ATP4BP51164 291 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 NME5P56597 212 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 OC90Q02509 493 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 MGAT2Q10469 447 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF155Q12901 538 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 NFATC3Q12968 1075 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 EXOSC7Q15024 291 aaKnown RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 ZNHIT3Q15649 155 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 FAM174BQ3ZCQ3 159 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 TRMT12Q53H54 448 aaKnown RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 TMEM198Q66K66 360 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 BHLHB9Q6PI77 547 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 TMEM64Q6YI46 380 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF551Q7Z340 670 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 OR2L13Q8N349 312 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 OR7G2Q8NG99 324 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 OR5P2Q8WZ92 322 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 KAT2AQ92830 837 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 TMEM125Q96AQ2 219 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 THOC1Q96FV9 657 aaKnown RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 MARK4Q96L34 752 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 MS4A4EQ96PG1 132 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 RASL10BQ96S79 203 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 NPAS2Q99743 824 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 SLAMF7Q9NQ25 335 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 TMEM45AQ9NWC5 275 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 HPF1Q9NWY4 346 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 KLHL14Q9P2G3 628 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 C19orf53Q9UNZ5 99 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 B3GNT3Q9Y2A9 372 aa11.28□□□□□ -0.6
SF3B3-208ENST00000567250 HEMK1Q9Y5R4 338 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-208ENST00000567250 K7EM74 188 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ACOX3O15254 700 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 EMC8O43402 210 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 IL6P05231 212 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 PGRP06401 933 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 CD46P15529 392 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 S1PR1P21453 382 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 SOAT1P35610 550 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 TNFSF10P50591 281 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 HLCSP50747 726 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ARFIP2P53365 341 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 UFM1P61960 85 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 TUBA3CQ13748 450 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 SQLEQ14534 574 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF169Q14929 603 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-208ENST00000567250 INAQ16352 499 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 PRSS53Q2L4Q9 553 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 SPDYE7PQ495Y7 208 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 VPS26BQ4G0F5 336 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 SPANXN4Q5MJ08 99 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 FHL5Q5TD97 284 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms