RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ISL2Q96A47 359 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PHF21BQ96EK2 531 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 WDYHV1Q96HA8 205 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TMEM41AQ96HV5 264 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 FRG2BQ96QU4 278 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 UGT2B28Q9BY64 529 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 POLDIP3Q9BY77 421 aaKnown RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 FUT8Q9BYC5 575 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 MRPL1Q9BYD6 325 aaKnown RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 NXF5Q9H1B4 397 aaKnown RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 CLEC4MQ9H2X3 399 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 EPB41L4BQ9H329 900 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 WDR41Q9HAD4 459 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 FARSBQ9NSD9 589 aaKnown RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 JKAMPQ9P055 326 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 CPSF2Q9P2I0 782 aaKnown RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 FETUBQ9UGM5 382 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 ADAM29Q9UKF5 820 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PCTPQ9UKL6 214 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 CBLCQ9ULV8 474 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 ACANP16112 2415 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 MBD3L4A6NDZ8 208 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 MBD3L3A6NE82 208 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 MBD3L5A6NJ08 208 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 CD8B2A6NJW9 211 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 STX16-NPEPL1H3BU86 382 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 DVL2O14641 736 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 STX16O14662 325 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 DIAPH2O60879 1101 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 ICOSLGO75144 302 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 SBK3P0C264 359 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 CD99P14209 185 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 PORP16435 677 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 NAGAP17050 411 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 GPX3P22352 226 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 PEX19P40855 299 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 SLCO1A2P46721 670 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 SERPINB8P50452 374 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 CCNG1P51959 295 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 CEBPEQ15744 281 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 UAP1Q16222 522 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 GGTA1PQ4G0N0 100 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 FLYWCH1Q4VC44 716 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 WIPI1Q5MNZ9 446 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 CCNYL2Q5T2Q4 361 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 C10orf62Q5T681 223 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 HLA-DQA1Q5Y7H0 255 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 SLC48A1Q6P1K1 146 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 FAM111BQ6SJ93 734 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 COMMD6Q7Z4G1 85 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 TGIF2LYQ8IUE0 185 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 PM20D2Q8IYS1 436 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 VWA5B2Q8N398 1253 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 FAM83FQ8NEG4 500 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 OR4F6Q8NGB9 312 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 MBD3L2Q8NHZ7 208 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 SLC44A1Q8WWI5 657 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF592Q92610 1267 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 HGDQ93099 445 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 ABTB1Q969K4 478 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 ATP6V1E2Q96A05 226 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 TM4SF18Q96CE8 201 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 CTHRC1Q96CG8 243 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF681Q96N22 645 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 NODALQ96S42 347 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 LRRC1Q9BTT6 524 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 VPS11Q9H270 941 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 ACSS3Q9H6R3 686 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 CALHM2Q9HA72 323 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 AHSPQ9NZD4 102 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 NINJ2Q9NZG7 142 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 MAT2BQ9NZL9 334 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 FOXD3Q9UJU5 478 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF225Q9UK10 706 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 PCDHA9Q9Y5H5 950 aa7.83□□□□□ -1.16
CAPN3-213ENST00000565173 FLNAP21333 2647 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 EXPH5Q8NEV8 1989 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 C1orf226A1L170 272 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 C2orf72A6NCS6 295 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 GNB5O14775 395 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 SNPHO15079 494 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 PPM1BO75688 479 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 CBX7O95931 251 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 PDYNP01213 254 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 IL2RAP01589 272 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 ATP1B1P05026 303 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 RPS17P08708 135 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 RBP1P09455 135 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 EPXP11678 715 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 CPN1P15169 458 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 CSNK2A2P19784 350 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 NT5EP21589 574 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 CTSSP25774 331 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 FEN1P39748 380 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 MASP1P48740 699 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 TMED10P49755 219 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 EMDP50402 254 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms