RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 HCN2Q9UL51 889 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 GPR52Q9Y2T5 361 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SF3B6Q9Y3B4 125 aaKnown RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 BACE2Q9Y5Z0 518 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CCL16O15467 120 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 DPM1O60762 260 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SEMA7AO75326 666 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 ABLIM3O94929 683 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 ETHE1O95571 254 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CD160O95971 181 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 PIPP12273 146 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 ANXA3P12429 323 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 BTCP35070 178 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 XCR1P46094 333 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 GSTM5P46439 218 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CCR6P51684 374 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SCARB2Q14108 478 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 COL28A1Q2UY09 1125 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 TECPR1Q7Z6L1 1165 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SRFBP1Q8NEF9 429 aaKnown RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 C2orf15Q8WU43 125 aaKnown RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 FOXJ1Q92949 421 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SGTBQ96EQ0 304 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RADILQ96JH8 1075 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 COQ10AQ96MF6 247 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 USB1Q9BQ65 265 aaKnown RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RSPO3Q9BXY4 272 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CHIAQ9BZP6 476 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 HCFC1R1Q9NWW0 138 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CXXC1Q9P0U4 656 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 ZNF624Q9P2J8 865 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CD84Q9UIB8 345 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SPATA2Q9UM82 520 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 TRBC2A0A5B9 178 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SLC22A23A1A5C7 686 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 OR10H3O60404 316 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 FGF18O76093 207 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CPEP16870 476 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 NUP62P37198 522 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RPL35P42766 123 aaKnown RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 MAPKAPK2P49137 400 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RGS4P49798 205 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 TPMTP51580 245 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 MVDP53602 400 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CDH4P55283 916 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RPS26P11Q5JNZ5 115 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 C6orf132Q5T0Z8 1188 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CASP12Q6UXS9 341 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 TMEM150AQ86TG1 271 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 NR2C2APQ86WQ0 139 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 OR4A15Q8NGL6 344 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 HERVK_113Q902F9 699 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SAMD11Q96NU1 681 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 OR51J1Q9H342 316 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SPATA6Q9NWH7 488 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 KCTD5Q9NXV2 234 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 HCN3Q9P1Z3 774 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CLEC4EQ9ULY5 219 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 TGM5O43548 720 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 CXCL14O95715 111 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 PCGF2P35227 344 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 ALDH9A1P49189 494 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 PLK5Q496M5 336 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 ZNF385BQ569K4 471 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 ADGRF3Q8IZF5 1079 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 REG4Q9BYZ8 158 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 ATPIF1Q9UII2 106 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 REV3LO60673 3130 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 KCNE1BA0A087WTH5 132 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 VIPR1P32241 457 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 LIMS1P48059 325 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 HBA1P69905 142 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 ZNF33BQ06732 778 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 PUM1Q14671 1186 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00554-201ENST00000564841 NTRK2Q16620 822 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 PLPP4Q5VZY2 271 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 ZNF770Q6IQ21 691 aaPredicted RBP15.4■□□□□ 0.06
LINC00554-201ENST00000564841 HMGN2P46Q86SG4 172 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 MARCH9Q86YJ5 346 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 FTMTQ8N4E7 242 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 CHTF18Q8WVB6 975 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 AP3S1Q92572 193 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 WDR89Q96FK6 387 aaPredicted RBP15.4■□□□□ 0.06
LINC00554-201ENST00000564841 LRR1Q96L50 414 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 C12orf66Q96MD2 445 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 FOPNLQ96NB1 174 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 P2RY13Q9BPV8 354 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 RNF32Q9H0A6 362 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 FOLH1BQ9HBA9 442 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 NKIRAS2Q9NYR9 191 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 CFAP97Q9P2B7 532 aa15.4■□□□□ 0.06
LINC00554-201ENST00000564841 RPL36Q9Y3U8 105 aaKnown RBP15.4■□□□□ 0.06
LINC00554-201ENST00000564841 TEX13CA0A0J9YWL9 993 aa15.39■□□□□ 0.05
LINC00554-201ENST00000564841 PRR23AA6NEV1 266 aa15.39■□□□□ 0.05
LINC00554-201ENST00000564841 SLC30A4O14863 429 aa15.39■□□□□ 0.05
LINC00554-201ENST00000564841 KDELR3O43731 214 aa15.39■□□□□ 0.05
LINC00554-201ENST00000564841 CLDN11O75508 207 aa15.39■□□□□ 0.05
LINC00554-201ENST00000564841 F11P03951 625 aa15.39■□□□□ 0.05
LINC00554-201ENST00000564841 SYN1P17600 705 aa15.39■□□□□ 0.05
LINC00554-201ENST00000564841 HK1P19367 917 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms