RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 C16orf52Q8NHV5 167 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 CIDECQ96AQ7 238 aaPredicted RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 COQ8BQ96D53 544 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 MAGED4Q96JG8 741 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 MAELQ96JY0 434 aaKnown RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 ZBTB18Q99592 522 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 WWTR1Q9GZV5 400 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 C3orf14Q9HBI5 128 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 HPF1Q9NWY4 346 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 LUZP4Q9P127 313 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 MAP10Q9P2G4 905 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 PCDHGB4Q9UN71 923 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 ATMQ13315 3056 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 TLN1Q9Y490 2541 aaKnown RBP14.8□□□□□ -0.04
RAB40C-208ENST00000564703 A0A087WV62 115 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 TMEM200CA6NKL6 621 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 CAPN14A8MX76 684 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 CFLARO15519 480 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 COQ9O75208 318 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 VIMP08670 466 aaKnown RBP14.8□□□□□ -0.04
RAB40C-208ENST00000564703 LAMP1P11279 417 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 IDO1P14902 403 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 AQP5P55064 265 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 EBPQ15125 230 aaKnown RBP14.8□□□□□ -0.04
RAB40C-208ENST00000564703 MAPKAPK3Q16644 382 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 GSTA3Q16772 222 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF766Q5HY98 468 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 COLEC12Q5KU26 742 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 SPINK14Q6IE38 97 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 SLC25A25Q6KCM7 469 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 IL20RBQ6UXL0 311 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 C16orf47Q6ZP98 133 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-208ENST00000564703 CYP4Z2PQ8N1L4 340 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 TMEM178AQ8NBL3 297 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 ELP4Q96EB1 424 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 RASL10BQ96S79 203 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 DUSP26Q9BV47 211 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 DDX18Q9NVP1 670 aaKnown RBP14.8□□□□□ -0.04
RAB40C-208ENST00000564703 CSAG2Q9Y5P2 127 aa14.8□□□□□ -0.04
RAB40C-208ENST00000564703 PLOD2O00469 737 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF195O14628 629 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 SLC28A2O43868 658 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 EDF1O60869 148 aaKnown RBP14.79□□□□□ -0.04
RAB40C-208ENST00000564703 C1QL1O75973 258 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 CBX7O95931 251 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 SP1P08047 785 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 IDH3AP50213 366 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 C21orf58P58505 322 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 GUCY1A3Q02108 690 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 DPY19L1Q2PZI1 675 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF385BQ569K4 471 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 RPUSD3Q6P087 351 aaKnown RBP14.79□□□□□ -0.04
RAB40C-208ENST00000564703 TMEM107Q6UX40 140 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 RIMKLAQ8IXN7 391 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 CPAMD8Q8IZJ3 1885 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 FAM98AQ8NCA5 519 aaKnown RBP14.79□□□□□ -0.04
RAB40C-208ENST00000564703 C17orf47Q8NEP4 570 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 OR7G2Q8NG99 324 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 OR5P2Q8WZ92 322 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 SGCZQ96LD1 299 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 RILPQ96NA2 401 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 SIGLEC12Q96PQ1 595 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 CCDC28BQ9BUN5 200 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 BHLHE41Q9C0J9 482 aaPredicted RBP14.79□□□□□ -0.04
RAB40C-208ENST00000564703 TRIM45Q9H8W5 580 aaPredicted RBP14.79□□□□□ -0.04
RAB40C-208ENST00000564703 TIMMDC1Q9NPL8 285 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 TCF7L2Q9NQB0 619 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 KLHL1Q9NR64 748 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 AIG1Q9NVV5 245 aa14.79□□□□□ -0.04
RAB40C-208ENST00000564703 C19orf53Q9UNZ5 99 aaPredicted RBP14.79□□□□□ -0.04
RAB40C-208ENST00000564703 COPG1Q9Y678 874 aaKnown RBP14.79□□□□□ -0.04
RAB40C-208ENST00000564703 KLRC4-KLRK1H3BQV0 150 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 SLC25A12O75746 678 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 SLC22A3O75751 556 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 RASAL1O95294 804 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 CLPSP04118 112 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 TROVE2P10155 538 aaKnown RBP eCLIP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 DRD5P21918 477 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 S100A3P33764 101 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 MDH1P40925 334 aaKnown RBP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 SOX3P41225 446 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 MC3RP41968 323 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 FRKP42685 505 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 PPICP45877 212 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 TMED10P49755 219 aaKnown RBP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 EMDP50402 254 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 PRKAG1P54619 331 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 NME5P56597 212 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 STX1BP61266 288 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 MLC1Q15049 377 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 ZNHIT3Q15649 155 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF468Q5VIY5 522 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 ANXA8L1Q5VT79 327 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 SZRD1Q7Z422 152 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 MAVSQ7Z434 540 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 DND1Q8IYX4 353 aaKnown RBP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 CISD2Q8N5K1 135 aaKnown RBP14.78□□□□□ -0.04
RAB40C-208ENST00000564703 MDS2Q8NDY4 140 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 ADIPOR1Q96A54 375 aa14.78□□□□□ -0.04
RAB40C-208ENST00000564703 HSPBAP1Q96EW2 488 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms