RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 IFFO1Q0D2I5 559 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 WIPI1Q5MNZ9 446 aaPredicted RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 L3MBTL4Q8NA19 623 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 OR2L5Q8NG80 312 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 ZNF473Q8WTR7 871 aaKnown RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 PIK3IP1Q96FE7 263 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 ROPN1BQ9BZX4 212 aaPredicted RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 REXO4Q9GZR2 422 aaKnown RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 NOL11Q9H8H0 719 aaKnown RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 ROPN1Q9HAT0 212 aaPredicted RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 PNO1Q9NRX1 252 aaKnown RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 LGALS13Q9UHV8 139 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 PCDHGA11Q9Y5H2 935 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 DSCAMO60469 2012 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 TLDC2A0PJX2 215 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 MBD3L3A6NE82 208 aaPredicted RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 H0YIV9 168 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 PSMD12O00232 456 aaPredicted RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 OR7A17O14581 309 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 PCNAP12004 261 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 ATP5F1P24539 256 aaPredicted RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 CRHR1P34998 444 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 PIGAP37287 484 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 PIK3CBP42338 1070 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 CCT5P48643 541 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 HERVK_113P63132 956 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 CRYZQ08257 329 aaKnown RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 TRIM40Q6P9F5 258 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 MBD3L2Q8NHZ7 208 aaPredicted RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 ZNF483Q8TF39 744 aaPredicted RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 IGFBPL1Q8WX77 278 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 ATP6V1E2Q96A05 226 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 NTNG2Q96CW9 530 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 REPS1Q96D71 796 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 FAR2Q96K12 515 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 NSUN5Q96P11 429 aaKnown RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 TRIB1Q96RU8 372 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 NTMT1Q9BV86 223 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 ERVK-6Q9BXR3 956 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 MS4A8Q9BY19 250 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 ZBTB26Q9HCK0 441 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 ZNF701Q9NV72 531 aaPredicted RBP16.54■□□□□ 0.24
E4F1-203ENST00000563643 EMCNQ9ULC0 261 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 USF3Q68DE3 2245 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 TGP01266 2768 aa16.54■□□□□ 0.24
E4F1-203ENST00000563643 A0A088AWK7 358 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 CD8B2A6NJW9 211 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 A8MV72 311 aaPredicted RBP16.53■□□□□ 0.24
E4F1-203ENST00000563643 SPRY1O43609 319 aaPredicted RBP16.53■□□□□ 0.24
E4F1-203ENST00000563643 DLX3O60479 287 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 CLDN9O95484 217 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 KRT4P19013 534 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 ZNF10P21506 573 aaPredicted RBP16.53■□□□□ 0.24
E4F1-203ENST00000563643 PPP2R1BP30154 601 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 CCNG1P51959 295 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 HK2P52789 917 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 ATP5J2P56134 94 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 BTN3A2P78410 334 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 SLC18A2Q05940 514 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 TGM3Q08188 693 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 TRAF3Q13114 568 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 VEZF1Q14119 521 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 TMEM35AQ53FP2 167 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 ABHD17CQ6PCB6 329 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 SLC22A9Q8IVM8 553 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 PM20D2Q8IYS1 436 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 LRRC25Q8N386 305 aaPredicted RBP16.53■□□□□ 0.24
E4F1-203ENST00000563643 SRFBP1Q8NEF9 429 aaKnown RBP16.53■□□□□ 0.24
E4F1-203ENST00000563643 OR52B6Q8NGF0 335 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 CMTM7Q96FZ5 175 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 QRFPRQ96P65 431 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 F2RL3Q96RI0 385 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 TIMP4Q99727 224 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 PIGQQ9BRB3 760 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 TMEM109Q9BVC6 243 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 PRDM14Q9GZV8 571 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 ZFP64Q9NPA5 681 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 BOKQ9UMX3 212 aaPredicted RBP16.53■□□□□ 0.24
E4F1-203ENST00000563643 RNF11Q9Y3C5 154 aa16.53■□□□□ 0.24
E4F1-203ENST00000563643 LRRC3CA6NJW4 275 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 OTCP00480 354 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 PROCP04070 461 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 TMIGD3P0DMS9 266 aaPredicted RBP16.52■□□□□ 0.24
E4F1-203ENST00000563643 RNH1P13489 461 aaKnown RBP16.52■□□□□ 0.24
E4F1-203ENST00000563643 PLA2G16P53816 162 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 PRKAA2P54646 552 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 KCNJ2P63252 427 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 PHEXP78562 749 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 DUSP8Q13202 625 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 SF3B4Q15427 424 aaKnown RBP eCLIP16.52■□□□□ 0.242e-10■■■■■ 46.4
E4F1-203ENST00000563643 CPSF6Q16630 551 aaKnown RBP eCLIP16.52■□□□□ 0.24
E4F1-203ENST00000563643 CCDC153Q494R4 210 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 GGTA1PQ4G0N0 100 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 PLEKHM3Q6ZWE6 761 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 HUS1BQ8NHY5 278 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 HS3ST6Q96QI5 342 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 NPLQ9BXD5 320 aaPredicted RBP16.52■□□□□ 0.24
E4F1-203ENST00000563643 REG4Q9BYZ8 158 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 MKS1Q9NXB0 559 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms