RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 EMX2Q04743 252 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 PTGR1Q14914 329 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 INAQ16352 499 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 SMU1Q2TAY7 513 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 ATP6AP1LQ52LC2 224 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 IL23RQ5VWK5 629 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 IL20RBQ6UXL0 311 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 TMEM64Q6YI46 380 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 LARP4Q71RC2 724 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBR1-204ENST00000563239 SLC29A4Q7RTT9 530 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 GALNTL5Q7Z4T8 443 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.89□□□□□ -1.15
UBR1-204ENST00000563239 WDR75Q8IWA0 830 aaKnown RBP7.89□□□□□ -1.15
UBR1-204ENST00000563239 RIMKLAQ8IXN7 391 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 GPALPP1Q8IXQ4 340 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 SAMD14Q8IZD0 417 aaPredicted RBP7.89□□□□□ -1.15
UBR1-204ENST00000563239 CYP4Z2PQ8N1L4 340 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 TMEM156Q8N614 296 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 SLC15A4Q8N697 577 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 KRTCAP2Q8N6L1 136 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 GALNT11Q8NCW6 608 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 OR7G2Q8NG99 324 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 OR52R1Q8NGF1 315 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 FAR1Q8WVX9 515 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 ASB15Q8WXK1 588 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 TP53INP1Q96A56 240 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 CIDECQ96AQ7 238 aaPredicted RBP7.89□□□□□ -1.15
UBR1-204ENST00000563239 TUBGCP3Q96CW5 907 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 AMDHD1Q96NU7 426 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 GAL3ST4Q96RP7 486 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 SLX1AQ9BQ83 275 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 NUF2Q9BZD4 464 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 REEP4Q9H6H4 257 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 MEAF6Q9HAF1 191 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 MIEF1Q9NQG6 463 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 ASIC5Q9NY37 505 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 ATP6V1HQ9UI12 483 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 METRNQ9UJH8 293 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 ABCA12Q86UK0 2595 aa7.89□□□□□ -1.15
UBR1-204ENST00000563239 TEX15Q9BXT5 2789 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 PINLYPA6NC86 204 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 A8MVJ9 347 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 UPK1AO00322 258 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 PLOD2O00469 737 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 ANKRD28O15084 1053 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 SCAMP2O15127 329 aaKnown RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 PLOD3O60568 738 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 RASAL1O95294 804 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 PSMG1O95456 288 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 LAMP1P11279 417 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 G6PDP11413 515 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 PRPS2P11908 318 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 GNLYP22749 145 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 MAPK1P28482 360 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 MPIP34949 423 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 ASMTP46597 345 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 NR0B1P51843 470 aaKnown RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 NCBP2P52298 156 aaKnown RBP eCLIP7.88□□□□□ -1.154e-7■■□□□ 14
UBR1-204ENST00000563239 C21orf58P58505 322 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 PPP2R2AP63151 447 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 SRSF1Q07955 248 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■■■■□ 22.2
UBR1-204ENST00000563239 MRPL49Q13405 166 aaKnown RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 MAPKAPK3Q16644 382 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 ATG16L1Q676U5 607 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 OPN5Q6U736 354 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 ZNF551Q7Z340 670 aaPredicted RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 SIAH3Q8IW03 269 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 SULF2Q8IWU5 870 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 TRIM42Q8IWZ5 723 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 FAM9CQ8IZT9 166 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 HORMAD2Q8N7B1 307 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 FNDC5Q8NAU1 212 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 TMEM178AQ8NBL3 297 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 C17orf47Q8NEP4 570 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 OR7A2PQ8NGA2 310 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 PPCDCQ96CD2 204 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 NTNG2Q96CW9 530 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 COQ8BQ96D53 544 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 ERP27Q96DN0 273 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 MTERF3Q96E29 417 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 ELP4Q96EB1 424 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 C5orf34Q96MH7 638 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 FRMD6Q96NE9 622 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 BBS4Q96RK4 519 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 ITPAQ9BY32 194 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 NXF5Q9H1B4 397 aaKnown RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 WDR55Q9H6Y2 383 aaPredicted RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 PROK2Q9HC23 129 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 PFDN4Q9NQP4 134 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 GIMAP4Q9NUV9 329 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 HPF1Q9NWY4 346 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 MARCOQ9UEW3 520 aaPredicted RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 BCAP29Q9UHQ4 241 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 C19orf53Q9UNZ5 99 aaPredicted RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 ENTPD4Q9Y227 616 aa7.88□□□□□ -1.15
UBR1-204ENST00000563239 GPR55Q9Y2T6 319 aaPredicted RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 UTP20O75691 2785 aaKnown RBP7.88□□□□□ -1.15
UBR1-204ENST00000563239 A0A087WV62 115 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 UQCRHLA0A096LP55 91 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms