RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 MS4A4EQ96PG1 132 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 TRNT1Q96Q11 434 aaKnown RBP8.92□□□□□ -0.98
CDH13-205ENST00000562307 TREX2Q9BQ50 279 aaPredicted RBP8.92□□□□□ -0.98
CDH13-205ENST00000562307 NUDT22Q9BRQ3 303 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 ANKRD60Q9BZ19 345 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 GABARAPL1Q9H0R8 117 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 LRRN3Q9H3W5 708 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 RUBCNLQ9H714 662 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 CUTCQ9NTM9 273 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 DDX18Q9NVP1 670 aaKnown RBP8.92□□□□□ -0.98
CDH13-205ENST00000562307 VNN3Q9NY84 501 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 MAT2BQ9NZL9 334 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 CALML5Q9NZT1 146 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 NDUFAF4Q9P032 175 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 HCN3Q9P1Z3 774 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 IFT80Q9P2H3 777 aaPredicted RBP8.92□□□□□ -0.98
CDH13-205ENST00000562307 SERTAD3Q9UJW9 196 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 BAG5Q9UL15 447 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 CDC14AQ9UNH5 594 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 CLCA2Q9UQC9 943 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 TMEM184BQ9Y519 407 aaPredicted RBP8.92□□□□□ -0.98
CDH13-205ENST00000562307 PCDHGB3Q9Y5G1 929 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 KCNE3Q9Y6H6 103 aa8.92□□□□□ -0.98
CDH13-205ENST00000562307 DSPPQ9NZW4 1301 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 CPED1A4D0V7 1026 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 H0YAE9 185 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 TGFBR3LH3BV60 316 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 hCG_2039718K7EN88 272 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 CLDN4O14493 209 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 DNAJB5O75953 348 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 OPN1SWP03999 348 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 FESP07332 822 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 CHRM4P08173 479 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 ITGA2P17301 1181 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 FPR1P21462 350 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 XCR1P46094 333 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 DUSP3P51452 185 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 HMGA2P52926 109 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 IST1P53990 364 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 ADARB1P78563 741 aaKnown RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 MRPS35P82673 323 aaKnown RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 ID2Q02363 134 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 KCNC4Q03721 635 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 MERTKQ12866 999 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 GK3PQ14409 553 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 PUM1Q14671 1186 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDH13-205ENST00000562307 DUSP7Q16829 419 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 SLC36A3Q495N2 470 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 TRMT12Q53H54 448 aaKnown RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 RPS26P11Q5JNZ5 115 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 UGT2A3Q6UWM9 527 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 TMPRSS9Q7Z410 1059 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 SZRD1Q7Z422 152 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 STK32CQ86UX6 486 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 CARM1Q86X55 608 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 KRT73Q86Y46 540 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 CDRT4Q8N9R6 151 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 SLC16A11Q8NCK7 471 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 CHDHQ8NE62 594 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 C7orf57Q8NEG2 295 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 GPR32P1Q8NGA4 272 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 OR51Q1Q8NH59 317 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 SPPL2AQ8TCT8 520 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 MAGEE2Q8TD90 523 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 ADAMTS15Q8TE58 950 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 SDCCAG3Q96C92 435 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 MMABQ96EY8 250 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 PEX11GQ96HA9 241 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 ZNF354BQ96LW1 612 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 OR1F2PQ96R84 312 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 ZNF300Q96RE9 604 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 STACQ99469 402 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 EPYCQ99645 322 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 RBM4BQ9BQ04 359 aaKnown RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 YIPF4Q9BSR8 244 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 SPATA5L1Q9BVQ7 753 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 RBM4Q9BWF3 364 aaKnown RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 SLC38A1Q9H2H9 487 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 PIGUQ9H490 435 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 ANKRA2Q9H9E1 313 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 CXorf21Q9HAI6 301 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 PRTFDC1Q9NRG1 225 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 LANCL2Q9NS86 450 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 EXD2Q9NVH0 621 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 SMPD3Q9NY59 655 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 UBAP1Q9NZ09 502 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 PCDHGB2Q9Y5G2 931 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 PCDHGA5Q9Y5G8 931 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 MAGED1Q9Y5V3 778 aaPredicted RBP8.91□□□□□ -0.98
CDH13-205ENST00000562307 ENPP4Q9Y6X5 453 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 PCDH15Q96QU1 1955 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 LAMA1P25391 3075 aa8.91□□□□□ -0.98
CDH13-205ENST00000562307 A8MU76 341 aa8.9□□□□□ -0.98
CDH13-205ENST00000562307 DLL1O00548 723 aa8.9□□□□□ -0.98
CDH13-205ENST00000562307 DSCR3O14972 297 aa8.9□□□□□ -0.98
CDH13-205ENST00000562307 ADAMDEC1O15204 470 aa8.9□□□□□ -0.98
CDH13-205ENST00000562307 CASC3O15234 703 aaKnown RBP8.9□□□□□ -0.98
CDH13-205ENST00000562307 HYAL3O43820 417 aaPredicted RBP8.9□□□□□ -0.98
CDH13-205ENST00000562307 LYNP07948 512 aa8.9□□□□□ -0.98
CDH13-205ENST00000562307 GUSBP08236 651 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms