RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 UBE3AQ05086 875 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 ELMOD2Q8IZ81 293 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 ADGRF3Q8IZF5 1079 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 KRT78Q8N1N4 520 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 OR5D16Q8NGK9 328 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 TEX47Q8TBZ9 253 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 CYB5D2Q8WUJ1 264 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 SORCS1Q8WY21 1168 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 OTUB1Q96FW1 271 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 F2RL3Q96RI0 385 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 FUZQ9BT04 418 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 PPP1R3EQ9H7J1 279 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 KCNK12Q9HB15 430 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 B3GAT2Q9NPZ5 323 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 PCDHGB7Q9Y5F8 929 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 IRGMA1A4Y4 181 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 ORC5O43913 435 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 DDX5P17844 614 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 SOX18P35713 384 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 CD79BP40259 229 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 CDK5Q00535 292 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 PRAMEF14Q5SWL7 426 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 PRAMEF13Q5VWM6 474 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 COMTD1Q86VU5 262 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 MARCH9Q86YJ5 346 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 LIX1LQ8IVB5 337 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 OR5H6Q8NGV6 325 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 UPRTQ96BW1 309 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 TM4SF18Q96CE8 201 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 PLA2G12AQ9BZM1 189 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 OR2AG1Q9H205 316 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 STMN3Q9NZ72 180 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 P2RX2Q9UBL9 471 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 ITM2BQ9Y287 266 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC9A8Q9Y2E8 581 aa13.2□□□□□ -0.3
VPS9D1-202ENST00000561976 PPP2R1BP30154 601 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 TNK1Q13470 666 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 GPR162Q16538 588 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC25A30Q5SVS4 291 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 TECPR1Q7Z6L1 1165 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 FBXO15Q8NCQ5 510 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 ZNF689Q96CS4 500 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 ZC3HAV1LQ96H79 300 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 MED30Q96HR3 178 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 QRFPRQ96P65 431 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 WACQ9BTA9 647 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 OR51I1Q9H343 314 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 EXOSC1Q9Y3B2 195 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 WASH3PC4AMC7 463 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 PI15O43692 258 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 TSC22D2O75157 780 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 MYCP01106 439 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 IFI30P13284 250 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 BUD31P41223 144 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 OR3A3P47888 321 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 EVX1P49640 407 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 CLDN20P56880 219 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 RRAS2P62070 204 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 C19orf57Q0VDD7 668 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 SREBF2Q12772 1141 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 MAB21L1Q13394 359 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 GRIN2CQ14957 1233 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 DEFB128Q7Z7B8 93 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 TBC1D19Q8N5T2 526 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 ANKK1Q8NFD2 765 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 NEIL3Q8TAT5 605 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 ATF6BQ99941 703 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 TMEM43Q9BTV4 400 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 LINC00597Q9H2U6 94 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 GALNT9Q9HCQ5 603 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 SIRT3Q9NTG7 399 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 KIAA1671Q9BY89 1806 aa13.19□□□□□ -0.3
VPS9D1-202ENST00000561976 A0A1W2PQ72 361 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 WASHC1A8K0Z3 465 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 NRG2O14511 850 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 HLA-DQB1P01920 261 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 ARSBP15848 533 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 CELP19835 753 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 FGF9P31371 208 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 GAS1P54826 345 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 TLE2Q04725 743 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 MAP4K2Q12851 820 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 CLEC12AQ5QGZ9 265 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC27A4Q6P1M0 643 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 MZT2AQ6P582 158 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 CD300LDQ6UXZ3 194 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 TMC8Q8IU68 726 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC37A3Q8NCC5 494 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 OR6T1Q8NGN1 323 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC35G5Q96KT7 338 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC38A2Q96QD8 506 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms