RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SH2D5Q6ZV89 423 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 METTL6Q8TCB7 284 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 ACMSDQ8TDX5 336 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 NRGNQ92686 78 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 L3HYPDHQ96EM0 354 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 CNRIP1Q96F85 164 aaPredicted RBP23.21■■□□□ 1.31
NME3-202ENST00000561637 APIPQ96GX9 242 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 UCK2Q9BZX2 261 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 BRINP2Q9C0B6 783 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 NXF5Q9H1B4 397 aaKnown RBP23.21■■□□□ 1.31
NME3-202ENST00000561637 ANKRA2Q9H9E1 313 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 TNFRSF12AQ9NP84 129 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 FAM215AQ9Y5M1 114 aa23.21■■□□□ 1.31
NME3-202ENST00000561637 MED12Q93074 2177 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 PHF3Q92576 2039 aaKnown RBP23.2■■□□□ 1.3
NME3-202ENST00000561637 A0A1B0GVC2 190 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 C1orf226A1L170 272 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 FAM90A27PA6NNH2 459 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 KRT6AP02538 564 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 KRT6BP04259 564 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 IL3P08700 152 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 IGFBP2P18065 325 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 HMOX2P30519 316 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 KRT6CP48668 564 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 TRPC1P48995 793 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 PMPCAQ10713 525 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 RTL6Q6ICC9 239 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 ZNF585AQ6P3V2 769 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 VWA5B2Q8N398 1253 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 CCNYL1Q8N7R7 359 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 ZNF681Q96N22 645 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 EBPLQ9BY08 206 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 ITPAQ9BY32 194 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 ZFP64Q9NPA5 681 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 FETUBQ9UGM5 382 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 NPFFR2Q9Y5X5 522 aa23.2■■□□□ 1.3
NME3-202ENST00000561637 NKX2-6A6NCS4 301 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 CBX7O95931 251 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 PCSK2P16519 638 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 DEKP35659 375 aaKnown RBP23.19■■□□□ 1.3
NME3-202ENST00000561637 MRPS35P82673 323 aaKnown RBP23.19■■□□□ 1.3
NME3-202ENST00000561637 LCP2Q13094 533 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 SLC10A1Q14973 349 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 TRMT12Q53H54 448 aaKnown RBP23.19■■□□□ 1.3
NME3-202ENST00000561637 HLA-DQA1Q5Y7H0 255 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 PAOXQ6QHF9 649 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 TAGAPQ8N103 731 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 LRRC25Q8N386 305 aaPredicted RBP23.19■■□□□ 1.3
NME3-202ENST00000561637 EPS8L3Q8TE67 593 aaKnown RBP23.19■■□□□ 1.3
NME3-202ENST00000561637 DIO2Q92813 273 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 DOHHQ9BU89 302 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 LDAHQ9H6V9 325 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 NPDC1Q9NQX5 325 aaPredicted RBP23.19■■□□□ 1.3
NME3-202ENST00000561637 DLGAP4Q9Y2H0 992 aa23.19■■□□□ 1.3
NME3-202ENST00000561637 AQP7O14520 342 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 PCDH7O60245 1069 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 PROCP04070 461 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 GSTA1P08263 222 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 MAN2A2P49641 1150 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 BTKQ06187 659 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 CSTF3Q12996 717 aaKnown RBP23.18■■□□□ 1.3
NME3-202ENST00000561637 RPS6KA2Q15349 733 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 PRSS53Q2L4Q9 553 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 ZYG11AQ6WRX3 759 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 LCA5Q86VQ0 697 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 SPPL2AQ8TCT8 520 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 UBLCP1Q8WVY7 318 aaPredicted RBP23.18■■□□□ 1.3
NME3-202ENST00000561637 TP53INP1Q96A56 240 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 TRIM44Q96DX7 344 aaPredicted RBP23.18■■□□□ 1.3
NME3-202ENST00000561637 EXO5Q9H790 373 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 CNIH4Q9P003 139 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 BCAP29Q9UHQ4 241 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 ZNF639Q9UID6 485 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 MCM8Q9UJA3 840 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 BOKQ9UMX3 212 aaPredicted RBP23.18■■□□□ 1.3
NME3-202ENST00000561637 PLLPQ9Y342 182 aa23.18■■□□□ 1.3
NME3-202ENST00000561637 TRGV5A0A0B4J1U4 118 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 TRIM3O75382 744 aaPredicted RBP23.17■■□□□ 1.3
NME3-202ENST00000561637 ULK1O75385 1050 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 ESRRBO95718 433 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 ATP1B1P05026 303 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 HSD3B1P14060 373 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 CSNK2A2P19784 350 aaPredicted RBP23.17■■□□□ 1.3
NME3-202ENST00000561637 HSD3B2P26439 372 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 ACVR2AP27037 513 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 DNAJA1P31689 397 aaKnown RBP23.17■■□□□ 1.3
NME3-202ENST00000561637 MAP4K2Q12851 820 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 FNDC7Q5VTL7 733 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 SLC22A9Q8IVM8 553 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 EID3Q8N140 333 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 OR7G1Q8NGA0 311 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 OR52R1Q8NGF1 315 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 RILPQ96NA2 401 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 MID1IP1Q9NPA3 183 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 COQ3Q9NZJ6 369 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 EHD3Q9NZN3 535 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 UTS2RQ9UKP6 389 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 ACAD8Q9UKU7 415 aa23.17■■□□□ 1.3
NME3-202ENST00000561637 AKAP6Q13023 2319 aa23.16■■□□□ 1.3
NME3-202ENST00000561637 ABCA2Q9BZC7 2435 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms