RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 RPL35AP18077 110 aaKnown RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 TYMPP19971 482 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 CYP3A5P20815 502 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 GLRA2P23416 452 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 MARCKSP29966 332 aaPredicted RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 TIMP3P35625 211 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 CASP3P42574 277 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 DCDC1P59894 354 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 NTHL1P78549 312 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 SLC34A1Q06495 639 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 SLC3A1Q07837 685 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 ZNF542PQ5EBM4 170 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 GFI1BQ5VTD9 330 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 ALKAL1Q6UXT8 129 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 CHMP1BQ7LBR1 199 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 APLFQ8IW19 511 aaPredicted RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 CD302Q8IX05 232 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 CCDC185Q8N715 623 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 AMER3Q8N944 861 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 LRTM2Q8N967 370 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 OR5AP2Q8NGF4 316 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 OR5T2Q8NGG2 359 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 OR4D10Q8NGI6 311 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 MAPK15Q8TD08 544 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 MRGPRDQ8TDS7 321 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 KIFAP3Q92845 792 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 ZNF274Q96GC6 653 aaPredicted RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 P2RY13Q9BPV8 354 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 LXNQ9BS40 222 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 EDEM2Q9BV94 578 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 CCDC94Q9BW85 323 aaPredicted RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 CACNG6Q9BXT2 260 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 TDRD1Q9BXT4 1180 aaKnown RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 PLA2G2FQ9BZM2 168 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 TRIM7Q9C029 511 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 FBXL4Q9UKA2 621 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 NDRG2Q9UN36 371 aaKnown RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 WDR37Q9Y2I8 494 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 KLK4Q9Y5K2 254 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 EPG5Q9HCE0 2579 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 SMCHD1A6NHR9 2005 aa3.27□□□□□ -1.89
HERC1-215ENST00000561436 KMT2BQ9UMN6 2715 aaPredicted RBP3.27□□□□□ -1.89
HERC1-215ENST00000561436 ANKRD11Q6UB99 2663 aaPredicted RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 A8MVM7 634 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 SNURFLB1AK76 121 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 H0YCG3 227 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 CPLX1O14810 134 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 ADAM12O43184 909 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 CHMP2AO43633 222 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 CYTIPO60759 359 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 CLN5O75503 358 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 SEC24AO95486 1093 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 SBK2P0C263 348 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 MCF2P10911 925 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 CEBPBP17676 345 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 RBMS1P29558 406 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 ATP6V1E1P36543 226 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 SLC1A3P43003 542 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 TSFMP43897 325 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 NR0B1P51843 470 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 KIAA1024LP59773 190 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 RPA4Q13156 261 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 RUNX3Q13761 415 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 ITGA9Q13797 1035 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 RPS6KA1Q15418 735 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 WLSQ5T9L3 541 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 PM20D1Q6GTS8 502 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 KLHL10Q6JEL2 608 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 ARMCX5Q6P1M9 558 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 PODNL1Q6PEZ8 512 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 BLOC1S2Q6QNY1 142 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 TMEM270Q6UE05 265 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 FIP1L1Q6UN15 594 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 CD300LGQ6UXG3 332 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 LPCAT2Q7L5N7 544 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 TRMT11Q7Z4G4 463 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 AQP12AQ8IXF9 295 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 HDDC3Q8N4P3 179 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 TMEM99Q8N816 258 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 TCEANCQ8N8B7 351 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 DDHD1Q8NEL9 900 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 OR6S1Q8NH40 331 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 SPATA3Q8NHX4 192 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 ERMNQ8TAM6 284 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 FAM76AQ8TAV0 307 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 SPATA18Q8TC71 538 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 APOBEC4Q8WW27 367 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 PSMG2Q969U7 264 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 CCDC47Q96A33 483 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 WBP1Q96G27 269 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 RBM41Q96IZ5 413 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 IFT74Q96LB3 600 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 CNOT6LQ96LI5 555 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 C10orf90Q96M02 699 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 IL12RB2Q99665 862 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 NUSAP1Q9BXS6 441 aaKnown RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 THAP2Q9H0W7 228 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 FAM124BQ9H5Z6 455 aaPredicted RBP3.26□□□□□ -1.89
HERC1-215ENST00000561436 RAB9BQ9NP90 201 aa3.26□□□□□ -1.89
HERC1-215ENST00000561436 MID1IP1Q9NPA3 183 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms