RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MED12LQ86YW9 2145 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 NCKAP5O14513 1909 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 ZC3H12DA2A288 527 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 H7C0C1 242 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 PLOD2O00469 737 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 OR1F1O43749 312 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CD8AP01732 235 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CDH1P12830 882 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 TNNT1P13805 278 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 PTNP21246 168 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CTNNA2P26232 953 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 SERPINB3P29508 390 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 MSH2P43246 934 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 ATP5OP48047 213 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 HSD17B7P56937 341 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 IRX1P78414 480 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 PRR5P85299 388 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CCZ1BP86790 482 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CCZ1P86791 482 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 RAB35Q15286 201 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 ZNF672Q499Z4 452 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 AARS2Q5JTZ9 985 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 OR2A2Q6IF42 318 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 MFSD7Q6UXD7 560 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CHMP1BQ7LBR1 199 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 PEG10Q86TG7 708 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 C17orf64Q86WR6 236 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CA13Q8N1Q1 262 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 MORN4Q8NDC4 146 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 OR4L1Q8NH43 312 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 OR14A16Q8NHC5 309 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 SLC2A12Q8TD20 617 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 UTP15Q8TED0 518 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 C10orf105Q8TEF2 133 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 ZNF418Q8TF45 676 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 PTPMT1Q8WUK0 201 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 DACT3Q96B18 629 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 FAM136AQ96C01 138 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 TRIM44Q96DX7 344 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 RCC1LQ96I51 464 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 RILPQ96NA2 401 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 BTBD9Q96Q07 612 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 ERGIC2Q96RQ1 377 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 PKP2Q99959 881 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 RBM4Q9BWF3 364 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 CACNG6Q9BXT2 260 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CCDC177Q9NQR7 707 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 TMEFF2Q9UIK5 374 aaPredicted RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 ANAPC5Q9UJX4 755 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 CNOT11Q9UKZ1 510 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 PROCRQ9UNN8 238 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 SH2B3Q9UQQ2 575 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 DTX4Q9Y2E6 619 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 C15orf41Q9Y2V0 281 aa4.76□□□□□ -1.65
HERC1-213ENST00000561359 WBP11Q9Y2W2 641 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 YLPM1P49750 1951 aaKnown RBP4.76□□□□□ -1.65
HERC1-213ENST00000561359 SYCE3A1L190 88 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 URADA6NGE7 173 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 MROH6A6NGR9 719 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 SLC22A20A6NK97 555 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 HACD1B0YJ81 288 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 C17orf105B2RV13 164 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 EIF3FO00303 357 aaPredicted RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 TP53I11O14683 189 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 EMC8O43402 210 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 NPHS1O60500 1241 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 PSIP1O75475 530 aaKnown RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 SNX4O95219 450 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 CGAP01215 116 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 CSF3P09919 207 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 ATF4P18848 351 aaPredicted RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 HOXA5P20719 270 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 RBL1P28749 1068 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 LIMS1P48059 325 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 TTPAP49638 278 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 STARP49675 285 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 PRAMEP78395 509 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 LGALS3BPQ08380 585 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 STX4Q12846 297 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 SEMA3AQ14563 771 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 RPS6KA1Q15418 735 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 CYP1B1Q16678 543 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 KLHL38Q2WGJ6 581 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 IQCCQ4KMZ1 466 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 AGAP6Q5VW22 663 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 E4F1Q66K89 784 aaPredicted RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 SBSNQ6UWP8 590 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 STAC2Q6ZMT1 411 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 RINLQ6ZS11 566 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 DTX2Q86UW9 622 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 DND1Q8IYX4 353 aaKnown RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 TBC1D19Q8N5T2 526 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 SLC15A4Q8N697 577 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 FAM47BQ8NA70 645 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 KBTBD8Q8NFY9 601 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 OR13J1Q8NGT2 312 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 OR14L1PQ8NHC6 308 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 NUBPLQ8TB37 319 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms