RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SH2D2AQ9NP31 389 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 PFDN4Q9NQP4 134 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 C2orf92A0A1B0GVN3 265 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 OR6C76A6NM76 312 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 A8MVJ9 347 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 DYRK3O43781 588 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 PEX1O43933 1283 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 GSTM5P46439 218 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 MEOX1P50221 254 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 OCRLQ01968 901 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 KCNC4Q03721 635 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 FAM180AQ6UWF9 173 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 CLEC18BQ6UXF7 455 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 IKBIPQ70UQ0 350 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 SLC29A4Q7RTT9 530 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 ZNF551Q7Z340 670 aaPredicted RBP12.82□□□□□ -0.36
TPM1-230ENST00000561266 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 SIAH3Q8IW03 269 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 KRTCAP2Q8N6L1 136 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 BCORP1Q8N888 145 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 CLEC18CQ8NCF0 446 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 PSD4Q8NDX1 1056 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 OR7G1Q8NGA0 311 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 OR7A2PQ8NGA2 310 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 NR4A3Q92570 626 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 C5orf34Q96MH7 638 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 AMDHD1Q96NU7 426 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 BBS4Q96RK4 519 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 REEP4Q9H6H4 257 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 VIPAS39Q9H9C1 493 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 HPF1Q9NWY4 346 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 NKIRAS1Q9NYS0 192 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 BCAP29Q9UHQ4 241 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 ERVK-11Q9UQG0 969 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 USP9XQ93008 2570 aaPredicted RBP12.82□□□□□ -0.36
TPM1-230ENST00000561266 PCNX3Q9H6A9 2034 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 DNAJC13O75165 2243 aa12.82□□□□□ -0.36
TPM1-230ENST00000561266 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 SDHDO14521 159 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 TBX19O60806 448 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 VPS4BO75351 444 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 FBXO45P0C2W1 286 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 RNF224P0DH78 156 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 G6PDP11413 515 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 PIGAP37287 484 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 MC3RP41968 323 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 NCBP2P52298 156 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM1-230ENST00000561266 DIO3P55073 304 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 FBXW4P57775 412 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 KCNK10P57789 538 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 INAQ16352 499 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 ATP6AP1LQ52LC2 224 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 BICRALQ6AI39 1079 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 MYO7BQ6PIF6 2116 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 NPSR1Q6W5P4 371 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 WDR53Q7Z5U6 358 aaPredicted RBP12.81□□□□□ -0.36
TPM1-230ENST00000561266 FAM9CQ8IZT9 166 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 FNDC5Q8NAU1 212 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 TMEM178AQ8NBL3 297 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 OR10G3Q8NGC4 313 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 OR5M3Q8NGP4 307 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 ZNF75CPQ92670 426 aaPredicted RBP12.81□□□□□ -0.36
TPM1-230ENST00000561266 MANSC1Q9H8J5 431 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 MIEF1Q9NQG6 463 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 OLAHQ9NV23 265 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 MARCOQ9UEW3 520 aaPredicted RBP12.81□□□□□ -0.36
TPM1-230ENST00000561266 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 VPS4AQ9UN37 437 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 ENTPD4Q9Y227 616 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 WBP11Q9Y2W2 641 aaKnown RBP12.81□□□□□ -0.36
TPM1-230ENST00000561266 TMED5Q9Y3A6 229 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 CHCHD2Q9Y6H1 151 aaPredicted RBP12.81□□□□□ -0.36
TPM1-230ENST00000561266 COL12A1Q99715 3063 aa12.81□□□□□ -0.36
TPM1-230ENST00000561266 ANKUB1A6NFN9 424 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 UPK1AO00322 258 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 CDK2AP1O14519 115 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 ZNF195O14628 629 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 SEMA7AO75326 666 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 KITP10721 976 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 LAMP1P11279 417 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 FRKP42685 505 aaPredicted RBP12.8□□□□□ -0.36
TPM1-230ENST00000561266 DNASE1L1P49184 302 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 CDK9P50750 372 aaKnown RBP12.8□□□□□ -0.36
TPM1-230ENST00000561266 CORO7P57737 925 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 EMX2Q04743 252 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 OPN5Q6U736 354 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 TMEM107Q6UX40 140 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 RTL4Q6ZR62 310 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 LARP4Q71RC2 724 aaKnown RBP eCLIP12.8□□□□□ -0.36
TPM1-230ENST00000561266 WDR75Q8IWA0 830 aaKnown RBP12.8□□□□□ -0.36
TPM1-230ENST00000561266 CHERPQ8IWX8 916 aaKnown RBP12.8□□□□□ -0.36
TPM1-230ENST00000561266 RIMKLAQ8IXN7 391 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 GPALPP1Q8IXQ4 340 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 HORMAD2Q8N7B1 307 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 ST6GALNAC3Q8NDV1 305 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 TP53INP1Q96A56 240 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 SPACA9Q96E40 222 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms