RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 SAMD14Q8IZD0 417 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 OR5M3Q8NGP4 307 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 RDH11Q8TC12 318 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 SPPL2AQ8TCT8 520 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 RND1Q92730 232 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 DIO2Q92813 273 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 C11orf24Q96F05 449 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 CNRIP1Q96F85 164 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 ZNF597Q96LX8 424 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 SHCBP1LQ9BZQ2 653 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 LDAHQ9H6V9 325 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 MID1IP1Q9NPA3 183 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 PNPLA3Q9NST1 481 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 UTS2RQ9UKP6 389 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 ADGRG4Q8IZF6 3080 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 MYO9AB2RTY4 2548 aa16.53■□□□□ 0.24
TNFAIP2-206ENST00000560428 GNG14A0A1W2PPG7 69 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 C19orf84I3L1E1 186 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 PLIN3O60664 434 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 SNX4O95219 450 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 RFPL3SP0C7P2 107 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 ABCD3P28288 659 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 CHRNB4P30926 498 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 TIA1P31483 386 aaKnown RBP eCLIP16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 CRHR1P34998 444 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 FBXW4P57775 412 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 DNAJB13P59910 316 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 HEPACAMQ14CZ8 416 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 TMEM198Q66K66 360 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 FAM111BQ6SJ93 734 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 TMEM64Q6YI46 380 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 FRMD7Q6ZUT3 714 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 CCNYL1Q8N7R7 359 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 ACBD4Q8NC06 268 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 ZNF675Q8TD23 568 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 ERP27Q96DN0 273 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 HSPBAP1Q96EW2 488 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 APIPQ96GX9 242 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 KCNA7Q96RP8 456 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 ANGPTL4Q9BY76 406 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 NXF5Q9H1B4 397 aaKnown RBP16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 HEY2Q9UBP5 337 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 BCAP29Q9UHQ4 241 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 DTX4Q9Y2E6 619 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 DLGAP4Q9Y2H0 992 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 TIMM22Q9Y584 194 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 PCDHGB3Q9Y5G1 929 aa16.52■□□□□ 0.24
TNFAIP2-206ENST00000560428 ABCA12Q86UK0 2595 aa16.52■□□□□ 0.23
TNFAIP2-206ENST00000560428 UBFD1O14562 309 aaKnown RBP16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 ACOX3O15254 700 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 WDR1O75083 606 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 CDH16O75309 829 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 BCAS2O75934 225 aaPredicted RBP16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 CBX7O95931 251 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 IL3P08700 152 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 HOXD4P09016 255 aaPredicted RBP16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 SOX18P35713 384 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 SLCO1A2P46721 670 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 DCAF7P61962 342 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 HMGCS1Q01581 520 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 DUSP2Q05923 314 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 DUSP8Q13202 625 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 WLSQ5T9L3 541 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 LURAP1LQ8IV03 231 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 RPRMLQ8N4K4 120 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 OR5M9Q8NGP3 310 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 C16orf78Q8WTQ4 265 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 JSRP1Q96MG2 331 aaPredicted RBP16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 RILPQ96NA2 401 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 SPOCK3Q9BQ16 436 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 ITPAQ9BY32 194 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 ENKD1Q9H0I2 346 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 EXO5Q9H790 373 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 EHD3Q9NZN3 535 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 PRODH2Q9UF12 536 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 ACAD8Q9UKU7 415 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 RNF6Q9Y252 685 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 FBN2P35556 2912 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 NCKAP5O14513 1909 aa16.51■□□□□ 0.23
TNFAIP2-206ENST00000560428 FOXO6A8MYZ6 492 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 COPEO14579 308 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 PPM1BO75688 479 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 LRATO95237 230 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 ENDOUP21128 410 aaKnown RBP16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 KIR3DL1P43629 444 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 NAGLUP54802 743 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 FOXA1P55317 472 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 NUP107P57740 925 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 PMPCAQ10713 525 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 EXOSC7Q15024 291 aaKnown RBP16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 LTB4RQ15722 352 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 CEBPEQ15744 281 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 TRMT12Q53H54 448 aaKnown RBP16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 ZNF628Q5EBL2 1059 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 ZNF585AQ6P3V2 769 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 B3GNT6Q6ZMB0 384 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 PACS2Q86VP3 889 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 ADCY4Q8NFM4 1077 aa16.5■□□□□ 0.23
TNFAIP2-206ENST00000560428 OR52R1Q8NGF1 315 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms