RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ABOP16442 354 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 TACR1P25103 407 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 FBXW4P57775 412 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 NAA20P61599 178 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 ADORA2A-AS1P86434 159 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 C2orf80Q0P641 193 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 KIAA0040Q15053 153 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 KRT71Q3SY84 523 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF628Q5EBL2 1059 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 ARL13AQ5H913 290 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 C6orf163Q5TEZ5 329 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 CES4AQ5XG92 561 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 HLA-DQA1Q5Y7H0 255 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 SLC22A10Q63ZE4 541 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 KANK2Q63ZY3 851 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 BICRALQ6AI39 1079 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 DESI1Q6ICB0 168 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 FAM71E1Q6IPT2 247 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 GK5Q6ZS86 529 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 Q6ZSR9 355 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 DOLPP1Q86YN1 238 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 TMEM251Q8N6I4 163 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 OR7G1Q8NGA0 311 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 OR52R1Q8NGF1 315 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 OR9A2Q8NGT5 310 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 PAQR8Q8TEZ7 354 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 KAT2AQ92830 837 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 TP53INP1Q96A56 240 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 EGLN2Q96KS0 407 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 PHF12Q96QT6 1004 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 SMC6Q96SB8 1091 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 ITPAQ9BY32 194 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 PFDN4Q9NQP4 134 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 SLC35C2Q9NQQ7 365 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 CNOT11Q9UKZ1 510 aaKnown RBP10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 CACNA1DQ01668 2161 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 ABCA12Q86UK0 2595 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 LRRC3CA6NJW4 275 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 ADAM10O14672 748 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 SEC22BO75396 215 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 RSL1D1O76021 490 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 RFPL3SP0C7P2 107 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 LINC00032P0C843 101 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 PTGS2P35354 604 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 ETV4P43268 484 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 MAGEA5P43359 124 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 EMDP50402 254 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF763Q0D2J5 394 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 CACNA1CQ13936 2221 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 NTRK2Q16620 822 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 UGT3A2Q3SY77 523 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF787Q6DD87 383 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 NOXRED1Q6NXP6 359 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 BNC2Q6ZN30 1099 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 TICAM1Q8IUC6 712 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 TAGAPQ8N103 731 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 FBXW8Q8N3Y1 598 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 AGR3Q8TD06 166 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 TRMOQ9BU70 441 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 ZDHHC11Q9H8X9 412 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 IL1RL2Q9HB29 575 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 MYNNQ9NPC7 610 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 RRAGDQ9NQL2 400 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 TNFRSF10DQ9UBN6 386 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 GIMAP2Q9UG22 337 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 MEMO1Q9Y316 297 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 DNAJC15Q9Y5T4 150 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 NPFFR2Q9Y5X5 522 aa10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-216ENST00000560243 MED12Q93074 2177 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ATP6AP2A0A1C7CYW4 349 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 NPHS1O60500 1241 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ATP6AP2O75787 350 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 BPGMP07738 259 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 DDCP20711 480 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 PRPH2P23942 346 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ABCD3P28288 659 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 CASP6P55212 293 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 KCNJ2P63252 427 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 HEPACAMQ14CZ8 416 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 RPS6KA2Q15349 733 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 CDSNQ15517 529 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 CEBPEQ15744 281 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 HYAL4Q2M3T9 481 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 EMC4Q5J8M3 183 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ANKRD26P1Q6NSI1 321 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 MRGPRGQ86SM5 289 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 CD163Q86VB7 1156 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 EXOC3L1Q86VI1 746 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 SLC22A16Q86VW1 577 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 C17orf47Q8NEP4 570 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 OR7G2Q8NG99 324 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 OR6Y1Q8NGX8 325 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 FAM76AQ8TAV0 307 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 FAM57AQ8TBR7 257 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ZNF675Q8TD23 568 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms