RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ENTPD4Q9Y227 616 aa13.68□□□□□ -0.22
RABGGTA-211ENST00000559850 HECTD1Q9ULT8 2610 aa13.68□□□□□ -0.22
RABGGTA-211ENST00000559850 SETXQ7Z333 2677 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 NINQ8N4C6 2090 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 COL12A1Q99715 3063 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 ATP6AP2A0A1C7CYW4 349 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 CYSRT1A8MQ03 144 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 LSM1O15116 133 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 AKAP10O43572 662 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 ATP6AP2O75787 350 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 CHEK2O96017 543 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 P04436 131 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 JUNP05412 331 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 FGF4P08620 206 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 FBXO45P0C2W1 286 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 SDC1P18827 310 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 DDCP20711 480 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 CNR1P21554 472 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 PRPH2P23942 346 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 PPIAP62937 165 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 C3AR1Q16581 482 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 CMPK2Q5EBM0 449 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 BEND6Q5SZJ8 279 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 BICRALQ6AI39 1079 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 LRIG3Q6UXM1 1119 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 CHERPQ8IWX8 916 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 ANKRD42Q8N9B4 389 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 GOLM1Q8NBJ4 401 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 OR7G1Q8NGA0 311 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 CTHRC1Q96CG8 243 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 C3orf30Q96M34 536 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 TSSK3Q96PN8 268 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 BBS4Q96RK4 519 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 TTTY12Q9BZ98 90 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 MIEF1Q9NQG6 463 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 GIMAP4Q9NUV9 329 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 EHD3Q9NZN3 535 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 BAIAP2L1Q9UHR4 511 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 TINAGQ9UJW2 476 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 LIPGQ9Y5X9 500 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 LRRK2Q5S007 2527 aa13.67□□□□□ -0.22
RABGGTA-211ENST00000559850 GTF3C1Q12789 2109 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 PTPN13Q12923 2485 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 SLC19A2O60779 497 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 HSPA4LO95757 839 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 BGNP21810 368 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 EMDP50402 254 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 NCBP2P52298 156 aaKnown RBP eCLIP13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 SLC22A10Q63ZE4 541 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 NCCRP1Q6ZVX7 275 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 FAM9CQ8IZT9 166 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 TAGAPQ8N103 731 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 SLC15A4Q8N697 577 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 POGLUT1Q8NBL1 392 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 OR7G2Q8NG99 324 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 FAM76AQ8TAV0 307 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 TP53INP1Q96A56 240 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 PGM2Q96G03 612 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 MAGED4Q96JG8 741 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 SGCZQ96LD1 299 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 PPP1R36Q96LQ0 422 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 PAIP2Q9BPZ3 127 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 FAM173AQ9BQD7 235 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 C1orf50Q9BV19 199 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 C20orf27Q9GZN8 174 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 PROK2Q9HC23 129 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 SH2D2AQ9NP31 389 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 SSU72Q9NP77 194 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 CNOT11Q9UKZ1 510 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 NPFFR2Q9Y5X5 522 aa13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 CHCHD2Q9Y6H1 151 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-211ENST00000559850 A0A1B0GTH9 108 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 MYO1GB0I1T2 1018 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 CCL21O00585 134 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 ZG16O60844 167 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 PEX11AO75192 247 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 ERLIN1O75477 346 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 CLDN1O95832 211 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 CELA3AP09093 270 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 DHRS4L1P0CG22 281 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 NEFHP12036 1026 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 EFNA1P20827 205 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 CA7P43166 264 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 KCNJ2P63252 427 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 RBPJQ06330 500 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 FOXO1Q12778 655 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 NTRK2Q16620 822 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 KRTCAP3Q53RY4 240 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 ZNF385BQ569K4 471 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 TMEM107Q6UX40 140 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 C3P1Q6ZMU1 363 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 TMEM251Q8N6I4 163 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 ZNF781Q8N8C0 355 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 ZNF675Q8TD23 568 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 MGARPQ8TDB4 240 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 PAQR8Q8TEZ7 354 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 NUDT8Q8WV74 236 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 CIDECQ96AQ7 238 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms