RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ZNF527Q8NB42 609 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 MZB1Q8WU39 189 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 SH3YL1Q96HL8 342 aaPredicted RBP10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 CNDP2Q96KP4 475 aaKnown RBP10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 TAPBPLQ9BX59 468 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 ITPAQ9BY32 194 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 NAA50Q9GZZ1 169 aaKnown RBP10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 NANOGQ9H9S0 305 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 DMRT3Q9NQL9 472 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 FGF21Q9NSA1 209 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 PRODH2Q9UF12 536 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 SHROOM3Q8TF72 1996 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 B4GAT1O43505 415 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 PCDHGA12O60330 932 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 CLEC3AO75596 197 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 CEACAM5P06731 702 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 PLGLB1Q02325 96 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 ATG9BQ674R7 924 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 TMEM207Q6UWW9 146 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 TMEM107Q6UX40 140 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 NUP43Q8NFH3 380 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 TEX47Q8TBZ9 253 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 TMEM125Q96AQ2 219 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 LGALS12Q96DT0 336 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 SLC38A2Q96QD8 506 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 TMEM246Q9BRR3 403 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 SLC35C2Q9NQQ7 365 aa10.11□□□□□ -0.79
CARMIL3-202ENST00000559694 FABP12A6NFH5 140 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 DRD3P35462 400 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 MAP2K4P45985 399 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 XCR1P46094 333 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 EMP2P54851 167 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 SRSF5Q13243 272 aaKnown RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 IL18Q14116 193 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 BICRALQ6AI39 1079 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 CCBE1Q6UXH8 406 aaPredicted RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 PHOX2BQ99453 314 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 SRPK3Q9UPE1 567 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 SIP14410 1827 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 HYKKA2RU49 373 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 NME4O00746 187 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 BCAS1O75363 584 aaPredicted RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 TRAPPC6AO75865 159 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 KLHL18O94889 574 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 DHFRP00374 187 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 NUDT6P53370 316 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 GNG2P59768 71 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 CSNK2BP67870 215 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 RPP38P78345 283 aaKnown RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 RNF111Q6ZNA4 994 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 OR2L3Q8NG85 312 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 OR4K17Q8NGC6 315 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 OR9A4Q8NGU2 314 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 RIT1Q92963 219 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 MRPL48Q96GC5 212 aaKnown RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 MMP27Q9H306 513 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 PAK1IP1Q9NWT1 392 aaPredicted RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 ACSL6Q9UKU0 697 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 CXorf51AA0A1B0GTR3 108 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 CPNE6O95741 557 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 OR12D1P0DN82 309 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 AHCYP23526 432 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 GRK6P43250 576 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 RPS26P62854 115 aaKnown RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 CDC73Q6P1J9 531 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 COMMD2Q86X83 199 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 CLECL1Q8IZS7 167 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 ZBTB20Q9HC78 741 aaPredicted RBP10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 MKLN1Q9UL63 735 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 NAALAD2Q9Y3Q0 740 aa10.1□□□□□ -0.79
CARMIL3-202ENST00000559694 TMX2-CTNND1H3BSU7 103 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ACOX3O15254 700 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 DIRAS1O95057 198 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ACADLP28330 430 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PTGS2P35354 604 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 KIR2DL1P43626 348 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 MC1RQ01726 317 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GANABQ14697 944 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 EIPR1Q53HC9 387 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 LCN1P1Q5VSP4 162 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 FAM83HQ6ZRV2 1179 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 C6orf120Q7Z4R8 191 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 EGLN2Q96KS0 407 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ALOXE3Q9BYJ1 711 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ACPTQ9BZG2 426 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ZDHHC5Q9C0B5 715 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 KIR3DX1Q9H7L2 352 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ARMC1Q9NVT9 282 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PTGFRNQ9P2B2 879 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ATXN7L1Q9ULK2 861 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 RNF6Q9Y252 685 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 APC2O95996 2303 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TRPM6Q9BX84 2022 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 SPTY2D1-AS1A0A0U1RR47 76 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 HMX2A2RU54 273 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 EFCAB7A8K855 629 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 E2F3O00716 465 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms