RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 FAM120BQ96EK7 910 aaKnown RBP10.09□□□□□ -0.79
TPM1-217ENST00000559108 OTUB1Q96FW1 271 aaPredicted RBP10.09□□□□□ -0.79
TPM1-217ENST00000559108 C16orf58Q96GQ5 468 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 MAGED4Q96JG8 741 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 VSTM2LQ96N03 204 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 HES7Q9BYE0 225 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 BHLHE41Q9C0J9 482 aaPredicted RBP10.09□□□□□ -0.79
TPM1-217ENST00000559108 FAM107BQ9H098 131 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 NXF5Q9H1B4 397 aaKnown RBP10.09□□□□□ -0.79
TPM1-217ENST00000559108 ACSS1Q9NUB1 689 aaPredicted RBP10.09□□□□□ -0.79
TPM1-217ENST00000559108 ZIM2Q9NZV7 527 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 LUZP4Q9P127 313 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 KLHL14Q9P2G3 628 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 MAP10Q9P2G4 905 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 PSME2Q9UL46 239 aa10.09□□□□□ -0.79
TPM1-217ENST00000559108 CNTRLQ7Z7A1 2325 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 A0A1W2PRB8 838 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 MKRN2OSH3BPM6 223 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 ATXN7O15265 892 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 PLOD3O60568 738 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SHOX2O60902 331 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 ITGA10O75578 1167 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SLC22A3O75751 556 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 OR6B1O95007 311 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 WDPCPO95876 746 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 PGRP06401 933 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 ABCB1P08183 1280 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 NTSP30990 170 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SOX3P41225 446 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 MAP3K8P41279 467 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 KIR3DL1P43629 444 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 ARFIP2P53365 341 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SRSF11Q05519 484 aaKnown RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 BIKQ13323 160 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 TUBA3CQ13748 450 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 RCAN2Q14206 197 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 MLC1Q15049 377 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 TLR1Q15399 786 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SOWAHCQ53LP3 525 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 JMJD6Q6NYC1 403 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 TUBA3EQ6PEY2 450 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SLC2A7Q6PXP3 512 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 ISLR2Q6UXK2 745 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 DNAJC14Q6Y2X3 702 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 R3HCC1LQ7Z5L2 792 aaKnown RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 RPS19BP1Q86WX3 136 aaKnown RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 PRR22Q8IZ63 422 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 MIER2Q8N344 545 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 Q8NA96 180 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 OR4N2Q8NGD1 307 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 OR5AK3PQ8NH89 298 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 FBXO30Q8TB52 745 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 HOXB13Q92826 284 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 SIGLEC12Q96PQ1 595 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 GAL3ST4Q96RP7 486 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 RASL10BQ96S79 203 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 ELAC2Q9BQ52 826 aaKnown RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 SIKE1Q9BRV8 207 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 DEFB126Q9BYW3 111 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 NMUR2Q9GZQ4 415 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 FOLH1BQ9HBA9 442 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SAR1AQ9NR31 198 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 GIMAP4Q9NUV9 329 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 SLAMF8Q9P0V8 285 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 NTMQ9P121 344 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 MYOTQ9UBF9 498 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 C19orf53Q9UNZ5 99 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
TPM1-217ENST00000559108 HEMK1Q9Y5R4 338 aaPredicted RBP10.08□□□□□ -0.8
TPM1-217ENST00000559108 CFAP46Q8IYW2 2715 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 SMG1Q96Q15 3661 aaKnown RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 A0A087WV62 115 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 A0A0G2JMM0 328 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 A0A1W2PPB8 328 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 A0A1W2PRS3 328 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 GMNCA6NCL1 334 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 KIR3DP1A8MWS1 328 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 RNASET2O00584 256 aaKnown RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 ADAM10O14672 748 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 SNX3O60493 162 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 NEURL1O76050 574 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ZFAND5O76080 213 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ALPPP05187 535 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 GSNP06396 782 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 CT45A8P0DMV1 189 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 CT45A9P0DMV2 189 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
TPM1-217ENST00000559108 ACP2P11117 423 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ICAM2P13598 275 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 NCF2P19878 526 aaPredicted RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 MPIP34949 423 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 CD96P40200 585 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ATP4BP51164 291 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 POLR2JP52435 117 aaKnown RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 MANFP55145 182 aaKnown RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 CASP9P55211 416 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 RPS26P62854 115 aaKnown RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 PSG6Q00889 435 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 SQLEQ14534 574 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 CT45A2Q5DJT8 189 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms