RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM1-216ENST00000558910 ARFIP1P53367 373 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 CASP6P55212 293 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 SLC37A1P57057 533 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 FBXW4P57775 412 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 C2orf80Q0P641 193 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 EBPQ15125 230 aaKnown RBP11.08□□□□□ -0.64
TPM1-216ENST00000558910 GALNTL6Q49A17 601 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 TRMT12Q53H54 448 aaKnown RBP11.08□□□□□ -0.64
TPM1-216ENST00000558910 C10orf62Q5T681 223 aaPredicted RBP11.08□□□□□ -0.64
TPM1-216ENST00000558910 BICRALQ6AI39 1079 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 WDR93Q6P2C0 686 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 RTL4Q6ZR62 310 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 SIAH3Q8IW03 269 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 DDIASQ8IXT1 998 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 GBP7Q8N8V2 638 aaPredicted RBP11.08□□□□□ -0.64
TPM1-216ENST00000558910 BANPQ8N9N5 519 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 OR52R1Q8NGF1 315 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 OR9A2Q8NGT5 310 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 CLHC1Q8NHS4 586 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 RDH11Q8TC12 318 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 EXO5Q9H790 373 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 SACM1LQ9NTJ5 587 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM1-216ENST00000558910 TUBA8Q9NY65 449 aaPredicted RBP11.08□□□□□ -0.64
TPM1-216ENST00000558910 SENP1Q9P0U3 644 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 MCM8Q9UJA3 840 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 CES1P1Q9UKY3 287 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 NBPF19A0A087WUL8 3843 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 A0A1B0GUH1 482 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 RGS16O15492 202 aaPredicted RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 AKAP10O43572 662 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 TRIM13O60858 407 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 NADKO95544 446 aaPredicted RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 STSP08842 583 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 HSD3B1P14060 373 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 CSNK2A2P19784 350 aaPredicted RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 HSD3B2P26439 372 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 MAGEA5P43359 124 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 TRPC1P48995 793 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 PER3P56645 1201 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 DNAJB13P59910 316 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 KCNJ2P63252 427 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 BIKQ13323 160 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 SPRED3Q2MJR0 410 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 SPIN4Q56A73 249 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 ANKRD26P1Q6NSI1 321 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 SPPL2CQ8IUH8 684 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 GHDCQ8N2G8 530 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 LRRC25Q8N386 305 aaPredicted RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 OR5M9Q8NGP3 310 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 PPP1R14CQ8TAE6 165 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 CAVIN3Q969G5 261 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 CNRIP1Q96F85 164 aaPredicted RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 CCDC120Q96HB5 630 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 PPP1R36Q96LQ0 422 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 BBS4Q96RK4 519 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 PAIP2Q9BPZ3 127 aaKnown RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 ITPAQ9BY32 194 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 TTTY12Q9BZ98 90 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 LDAHQ9H6V9 325 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 TRIM45Q9H8W5 580 aaPredicted RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 KCNK9Q9NPC2 374 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 ALKBH4Q9NXW9 302 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 SUCOQ9UBS9 1254 aaKnown RBP11.07□□□□□ -0.64
TPM1-216ENST00000558910 GIMAP2Q9UG22 337 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 MID2Q9UJV3 735 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 PSME2Q9UL46 239 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 ENTPD4Q9Y227 616 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 PCDHGB6Q9Y5F9 930 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 LIPGQ9Y5X9 500 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 CROCCQ5TZA2 2017 aa11.07□□□□□ -0.64
TPM1-216ENST00000558910 A6NJY4 79 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 NPIPA2E9PIF3 369 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 NPIPA3F8WFD2 350 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 ACOT7O00154 380 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 AZIN1O14977 448 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 SKAP2O75563 359 aaPredicted RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 JUNP05412 331 aaKnown RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 SNRPB2P08579 225 aaKnown RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 CELA3AP09093 270 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 UROSP10746 265 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 EFNA1P20827 205 aaPredicted RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 CNR1P21554 472 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 ZNF844Q08AG5 666 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 DUSP8Q13202 625 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 TOMM20Q15388 145 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 PRSS53Q2L4Q9 553 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 PRICKLE4Q2TBC4 344 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 KRTCAP3Q53RY4 240 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 CMPK2Q5EBM0 449 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 SH2D4BQ5SQS7 431 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 CEP85LQ5SZL2 805 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 SLC22A10Q63ZE4 541 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 FGD2Q7Z6J4 655 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 CD163Q86VB7 1156 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 TICAM1Q8IUC6 712 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 ZNF295-AS1Q8N0V1 137 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 TAGAPQ8N103 731 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 ARMC10Q8N2F6 343 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms