RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GRID1Q9ULK0 1009 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 PLLPQ9Y342 182 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 POLR3HQ9Y535 204 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-208ENST00000558827 NPFFR2Q9Y5X5 522 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 CHCHD2Q9Y6H1 151 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-208ENST00000558827 GOLGA6L10A6NI86 522 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 LRRC3CA6NJW4 275 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 OR6C76A6NM76 312 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 FAM90A27PA6NNH2 459 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 E9PLN8 166 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 GNB5O14775 395 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 TRAPPC6AO75865 159 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 CBX7O95931 251 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 ANXA4P09525 319 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-208ENST00000558827 HSD3B1P14060 373 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 GPX3P22352 226 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 HSD3B2P26439 372 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 TIA1P31483 386 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMAD3-208ENST00000558827 GALNSP34059 522 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 CRHR1P34998 444 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 KIR3DL1P43629 444 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 MAN2A2P49641 1150 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 TOMM20Q15388 145 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 NTRK2Q16620 822 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 XKRXQ6PP77 449 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 PAOXQ6QHF9 649 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 BNC2Q6ZN30 1099 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-208ENST00000558827 FBXW8Q8N3Y1 598 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 SLC15A4Q8N697 577 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 OR9A2Q8NGT5 310 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF681Q96N22 645 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 VKORC1Q9BQB6 163 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 ZDHHC11Q9H8X9 412 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 ZFP64Q9NPA5 681 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 PLSCR2Q9NRY7 297 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 SPRR3Q9UBC9 169 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 ACAD8Q9UKU7 415 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 ENTPD4Q9Y227 616 aa11.5□□□□□ -0.57
SMAD3-208ENST00000558827 INTS1Q8N201 2190 aaKnown RBP11.5□□□□□ -0.57
SMAD3-208ENST00000558827 LRBAP50851 2863 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 TRGV5A0A0B4J1U4 118 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 NKX2-6A6NCS4 301 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 HNRNPRO43390 633 aaKnown RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 CLDN14O95500 239 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 CREB1P16220 341 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 GDF1P27539 372 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 NUP107P57740 925 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 MAP4K2Q12851 820 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF630Q2M218 657 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 CCDC153Q494R4 210 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 FRMD7Q6ZUT3 714 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 TDRPQ86YL5 185 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 MCEMP1Q8IX19 187 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 LRRC25Q8N386 305 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 GBP7Q8N8V2 638 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 EIF1ADQ8N9N8 165 aaKnown RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 OR7G1Q8NGA0 311 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 OR10Q1Q8NGQ4 319 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 SPPL2AQ8TCT8 520 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 GFM2Q969S9 779 aaKnown RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 TP53INP1Q96A56 240 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 OMA1Q96E52 524 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 CCDC126Q96EE4 140 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 RILPQ96NA2 401 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 GNRHR2Q96P88 292 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 NODALQ96S42 347 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 MECRQ9BV79 373 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 GATA5Q9BWX5 397 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 OXSMQ9NWU1 459 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 SLC17A7Q9P2U7 560 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 BOKQ9UMX3 212 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-208ENST00000558827 RNF6Q9Y252 685 aa11.49□□□□□ -0.57
SMAD3-208ENST00000558827 TP53I11O14683 189 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 CDH16O75309 829 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 ATP1B1P05026 303 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 JUNP05412 331 aaKnown RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 COX6B1P14854 86 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 ENDOUP21128 410 aaKnown RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 TCEA1P23193 301 aaKnown RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 ABCD3P28288 659 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 MASP1P48740 699 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 EMDP50402 254 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 WNT3P56703 355 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 NRG3P56975 720 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 CORO7P57737 925 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 DNAJB13P59910 316 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 SLC18A2Q05940 514 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 PCLAFQ15004 111 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 RPS6KA2Q15349 733 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 SPIN4Q56A73 249 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 TMEM198Q66K66 360 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 ANKRD26P1Q6NSI1 321 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 RGS9BPQ6ZS82 235 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 WDR53Q7Z5U6 358 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 TICAM1Q8IUC6 712 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 RDH11Q8TC12 318 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms