RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NCF1CA8MVU1 366 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF879B4DU55 563 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SLC22A1O15245 554 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PRDM1O75626 825 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CDC123O75794 336 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CT45A8P0DMV1 189 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CT45A9P0DMV2 189 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 AADACP22760 399 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CMA1P23946 247 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 DUTP33316 252 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CETN2P41208 172 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CDKN1BP46527 198 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ARHGDIAP52565 204 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GBX2P52951 348 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NLRP11P59045 1033 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 DRP2Q13474 957 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 STK38Q15208 465 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SGCBQ16585 318 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SLC5A12Q1EHB4 618 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CT45A2Q5DJT8 189 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SAPCD1Q5SSQ6 148 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CEP85LQ5SZL2 805 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NPSR1Q6W5P4 371 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 FAM47EQ6ZV65 393 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 C1orf186Q6ZWK4 172 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 FCRLAQ7L513 359 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SLC16A9Q7RTY1 509 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ADAMTSL2Q86TH1 951 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CLVS1Q8IUQ0 354 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NUP93Q8N1F7 819 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 OR8J2Q8NGG1 315 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 OR1E3Q8WZA6 343 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TSACCQ96A04 125 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CEP170P1Q96L14 293 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NSMCE3Q96MG7 304 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GUCD1Q96NT3 240 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 KLHL5Q96PQ7 755 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TAAR6Q96RI8 345 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NODALQ96S42 347 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SPAG8Q99932 426 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ACAT2Q9BWD1 397 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 FAM49AQ9H0Q0 323 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TMEM245Q9H330 911 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 C8orf4Q9NR00 106 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 APOBEC3BQ9UH17 382 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TSPAN16Q9UKR8 245 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 RNF150Q9ULK6 438 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NAALAD2Q9Y3Q0 740 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 MFHAS1Q9Y4C4 1052 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SNED1Q8TER0 1413 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 KIAA0232Q92628 1395 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CHD1O14646 1710 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TRAV18A0A075B6X5 111 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LOC105371242A0A075B767 164 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SERTM2A0A1B0GWG4 89 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LRRIQ3A6PVS8 624 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GOLGA8SH3BPF8 625 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 HAS3O00219 553 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TSPAN2O60636 221 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SHOX2O60902 331 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NR3C1P04150 777 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 HBQ1P09105 142 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CFC1BP0CG36 223 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CFC1P0CG37 223 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC2A2P11168 524 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RALAP11233 206 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TYMPP19971 482 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CCNE1P24864 410 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CTNNA2P26232 953 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PIK3R1P27986 724 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 MDH1P40925 334 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NKX2-1P43699 371 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CDH6P55285 790 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GMFBP60983 142 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SRP54P61011 504 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RIPK1Q13546 671 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 MTHFSDQ2M296 383 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC73Q5JTD7 316 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CLVS2Q5SYC1 327 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ADAMTSL4-AS1Q5T5F5 129 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ADAM5Q6NVV9 412 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SHQ1Q6PI26 577 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LHFPL4Q7Z7J7 247 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF679Q8IYX0 411 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC22A15Q8IZD6 547 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF444Q8N0Y2 327 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 HDDC3Q8N4P3 179 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ANKRD13CQ8N6S4 541 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NEK11Q8NG66 645 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 OR7A2PQ8NGA2 310 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TEX47Q8TBZ9 253 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC8CQ8TDW0 803 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 IFT81Q8WYA0 676 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GTF3AQ92664 365 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PRCCQ92733 491 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DUS3LQ96G46 650 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NSL1Q96IY1 281 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF354BQ96LW1 612 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC42Q96M95 316 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 COQ7Q99807 217 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms