RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 HOXD12P35452 270 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 DRD3P35462 400 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 FRKP42685 505 aaPredicted RBP16.71■□□□□ 0.27
XRCC3-218ENST00000557439 SNRPNP63162 240 aaKnown RBP16.71■□□□□ 0.27
XRCC3-218ENST00000557439 SF3B4Q15427 424 aaKnown RBP eCLIP16.71■□□□□ 0.27
XRCC3-218ENST00000557439 TIMM50Q3ZCQ8 353 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 SYT14P1Q58G82 188 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 CLEC12AQ5QGZ9 265 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 ATAT1Q5SQI0 421 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 TMEM53Q6P2H8 277 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 TMEM107Q6UX40 140 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 KIF18BQ86Y91 864 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 OR52I1Q8NGK6 324 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 TXNDC15Q96J42 360 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 DHRS1Q96LJ7 313 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 GPR55Q9Y2T6 319 aaPredicted RBP16.71■□□□□ 0.27
XRCC3-218ENST00000557439 TSC22D4Q9Y3Q8 395 aa16.71■□□□□ 0.27
XRCC3-218ENST00000557439 ERI3O43414 337 aaKnown RBP16.71■□□□□ 0.26
XRCC3-218ENST00000557439 CDRT1O95170 752 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 PIPP12273 146 aaPredicted RBP16.71■□□□□ 0.26
XRCC3-218ENST00000557439 BCL6P41182 706 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 GSTM5P46439 218 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 CAV3P56539 151 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 RAB8AP61006 207 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 RHAGQ02094 409 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 C22orf42Q6IC83 251 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 USP30Q70CQ3 517 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 ADGRD2Q7Z7M1 963 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 PHC2Q8IXK0 858 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 NANOGP1Q8N7R0 232 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 OR8J1Q8NGP2 316 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 DOK4Q8TEW6 326 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 CREB3L4Q8TEY5 395 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 BBS4Q96RK4 519 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 CNIH4Q9P003 139 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 ACAD8Q9UKU7 415 aa16.71■□□□□ 0.26
XRCC3-218ENST00000557439 A0A0A6YYD5 115 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 LRIT2A6NDA9 550 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 MYL12BO14950 172 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 PDE9AO76083 593 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 CH25HO95992 272 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 FHP07954 510 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 CXCR2P25025 360 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 GPAT3Q53EU6 434 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 ZNF362Q5T0B9 420 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-218ENST00000557439 OR2A1Q8NGT9 310 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 SLC35B4Q969S0 331 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 CNRIP1Q96F85 164 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-218ENST00000557439 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 SLC35C2Q9NQQ7 365 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 TOR4AQ9NXH8 423 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 IL20RAQ9UHF4 553 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 TRANK1O15050 2925 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 SPTBN5Q9NRC6 3674 aaKnown RBP16.7■□□□□ 0.26
XRCC3-218ENST00000557439 A0A1W2PR48 441 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 ASNA1O43681 348 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 OXSR1O95747 527 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-218ENST00000557439 FGBP02675 491 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 PSMA1P25786 263 aaKnown RBP16.7■□□□□ 0.26
XRCC3-218ENST00000557439 PCYT1AP49585 367 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 SLAMF1Q13291 335 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 ZNF79Q15937 498 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 UBE2J2Q8N2K1 259 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 IL17RDQ8NFM7 739 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 FCRL4Q96PJ5 515 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 OR2A14Q96R47 310 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 C6orf106Q9H6K1 298 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-218ENST00000557439 RPL36Q9Y3U8 105 aaKnown RBP16.7■□□□□ 0.26
XRCC3-218ENST00000557439 V9GYH0 126 aa16.7■□□□□ 0.26
XRCC3-218ENST00000557439 MUC22E2RYF6 1773 aaPredicted RBP16.69■□□□□ 0.26
XRCC3-218ENST00000557439 GIPRP48546 466 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 VASPP50552 380 aaPredicted RBP16.69■□□□□ 0.26
XRCC3-218ENST00000557439 FGL2Q14314 439 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 SNAPC1Q16533 368 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 TMEM201Q5SNT2 666 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 FBXL6Q8N531 539 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 GATAD2BQ8WXI9 593 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 SLC9A6Q92581 669 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 ZNF582Q96NG8 517 aaPredicted RBP16.69■□□□□ 0.26
XRCC3-218ENST00000557439 MND1Q9BWT6 205 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 C11orf49Q9H6J7 331 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 DDX31Q9H8H2 851 aaKnown RBP16.69■□□□□ 0.26
XRCC3-218ENST00000557439 NDOR1Q9UHB4 597 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 MKLN1Q9UL63 735 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 SPIN1Q9Y657 262 aaPredicted RBP16.69■□□□□ 0.26
XRCC3-218ENST00000557439 CERS1P27544 350 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 SSTR4P31391 388 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 RNF144AP50876 292 aaPredicted RBP16.69■□□□□ 0.26
XRCC3-218ENST00000557439 DAB2P98082 770 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 NCF4Q15080 339 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 ADAMTSL4Q6UY14 1074 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 VRK2Q86Y07 508 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 MORN4Q8NDC4 146 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 OR8D4Q8NGM9 314 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 SUN3Q8TAQ9 357 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 CAPSLQ8WWF8 208 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 TM9SF4Q92544 642 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 TM9SF2Q99805 663 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 RACGAP1Q9H0H5 632 aa16.69■□□□□ 0.26
XRCC3-218ENST00000557439 A6NL46 340 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms