RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-210	ENST00000557431	ABCB1	P08183	1280 aa	Predicted RBP	12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	SLC35E2	P0CK97	266 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	GFAP	P14136	432 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	PIK3R1	P27986	724 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	SERPINB1	P30740	379 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	ARL1	P40616	181 aa	Predicted RBP	12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	PIK3CB	P42338	1070 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	FUT7	Q11130	342 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	GTF2H2	Q13888	395 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	TRADD	Q15628	312 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	TBCEL	Q5QJ74	424 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	GRTP1	Q5TC63	336 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR52E8	Q6IFG1	317 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	GTF2H2C	Q6P1K8	395 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	CLEC9A	Q6UXN8	241 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	BIVM	Q86UB2	503 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	NUDT13	Q86X67	352 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	KIF18B	Q86Y91	864 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR1J4	Q8NGS1	313 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	WDR20	Q8TBZ3	569 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	FBF1	Q8TES7	1133 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	INTS12	Q96CB8	462 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	TMEM41A	Q96HV5	264 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	BRINP2	Q9C0B6	783 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	DDX31	Q9H8H2	851 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	METTL7A	Q9H8H3	244 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	WDR41	Q9HAD4	459 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	GRHL1	Q9NZI5	618 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	JKAMP	Q9P055	326 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	WIF1	Q9Y5W5	379 aa		12.83	□□□□□ -0.36
SLIRP-210	ENST00000557431	CAPN14	A8MX76	684 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431		H0Y3Z8	333 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	CCDC188	H7C350	402 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	RAD51C	O43502	376 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	SNX4	O95219	450 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	CYP4B1	P13584	511 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	KRT15	P19012	456 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	S1PR1	P21453	382 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	PTX3	P26022	381 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	CPOX	P36551	454 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	CPA2	P48052	419 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	XK	P51811	444 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	GNG11	P61952	73 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	NKX6-1	P78426	367 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	PHEX	P78562	749 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	PCDH1	Q08174	1060 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	C2orf54	Q08AI8	447 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	BIK	Q13323	160 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	RCAN2	Q14206	197 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	LTB4R	Q15722	352 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	NHSL2	Q5HYW2	709 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	UBAP2	Q5T6F2	1119 aa	Known RBP	12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	LIPJ	Q5W064	366 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	TIGD3	Q6B0B8	471 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	RPS27L	Q71UM5	84 aa	Known RBP	12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	ADCY4	Q8NFM4	1077 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR52B6	Q8NGF0	335 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	HGD	Q93099	445 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	TP53INP1	Q96A56	240 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	OMA1	Q96E52	524 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	G6PC3	Q9BUM1	346 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	OSBPL11	Q9BXB4	747 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	MRPL1	Q9BYD6	325 aa	Known RBP	12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	ZNF395	Q9H8N7	513 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	IPPK	Q9H8X2	491 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	ANKRA2	Q9H9E1	313 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	NEUROD4	Q9HD90	331 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	BCAP29	Q9UHQ4	241 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	ADGRE2	Q9UHX3	823 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	EDAR	Q9UNE0	448 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	PCDHGA11	Q9Y5H2	935 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	TLN2	Q9Y4G6	2542 aa		12.82	□□□□□ -0.36
SLIRP-210	ENST00000557431	USF3	Q68DE3	2245 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	CHD3	Q12873	2000 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	NSD1	Q96L73	2696 aa	Predicted RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	SH3D21	A4FU49	640 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431		H0YIV9	168 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR7A17	O14581	309 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	SNPH	O15079	494 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	SMAD7	O15105	426 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	SIAH2	O43255	324 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	ICOSLG	O75144	302 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	UGT2B11	O75310	529 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	ERN1	O75460	977 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	PPM1B	O75688	479 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	LY6G6D	O95868	133 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	KLK1	P06870	262 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	CPM	P14384	443 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	OPRM1	P35372	400 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	FEN1	P39748	380 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	TMED10	P49755	219 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	NRG3	P56975	720 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	SORD	Q00796	357 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	CALCOCO2	Q13137	446 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	SGO1	Q5FBB7	561 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	CXorf67	Q86X51	503 aa	Predicted RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	TRIM42	Q8IWZ5	723 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	PLD6	Q8N2A8	252 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR4K14	Q8NGD5	310 aa		12.81	□□□□□ -0.36

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