RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TMEM30AQ9NV96 361 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 TMEM248Q9NWD8 314 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FAM118AQ9NWS6 357 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SCN3BQ9NY72 215 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ANKMY1Q9P2S6 941 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MTRRQ9UBK8 725 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 KLQ9UEF7 1012 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SLC2A6Q9UGQ3 507 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZNF580Q9UK33 172 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ERVW-1Q9UQF0 538 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 TPRKBQ9Y3C4 175 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 TRPV2Q9Y5S1 764 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 COL4A4P53420 1690 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MN1Q10571 1320 aaPredicted RBP4.46□□□□□ -1.69
ATXN3-246ENST00000557030 TSC2P49815 1807 aa4.46□□□□□ -1.69
ATXN3-246ENST00000557030 TRPM7Q96QT4 1865 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 MYBPHLA2RUH7 354 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 H0Y626 953 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 M0QX08 132 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 TAF4O00268 1085 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 UPK1AO00322 258 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 SLC1A7O00341 560 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 GNGT2O14610 69 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RSL1D1O76021 490 aaKnown RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RECQL5O94762 991 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 TRIM16O95361 564 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 NADKO95544 446 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 CLIC3O95833 236 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 EPOP01588 193 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 IGLV3-25P01717 112 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 CHRNA1P02708 482 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RETP07949 1114 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 LINC00032P0C843 101 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 CYP4B1P13584 511 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 HOXB2P14652 356 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF24P17028 368 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 HOXB9P17482 250 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 PTPN2P17706 415 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 CD9P21926 228 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ELK4P28324 431 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 CD40LGP29965 261 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 AVPR2P30518 371 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 SERPINB1P30740 379 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 SHMT2P34897 504 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 POLR2IP36954 125 aaKnown RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 MTHFRP42898 656 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 YAP1P46937 504 aaKnown RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 HTR6P50406 440 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 STC1P52823 247 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 PPP5CP53041 499 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 HUNKP57058 714 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 CSNK2BP67870 215 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 TUBA1BP68363 451 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 PPP2R2BQ00005 443 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 YWHAHQ04917 246 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 MAD2L1Q13257 205 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 SPCS2Q15005 226 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RBBP7Q16576 425 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 FUT11Q495W5 492 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ATP6AP1LQ52LC2 224 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RUNDC3AQ59EK9 446 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 XKR7Q5GH72 579 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 OTUD3Q5T2D3 398 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 MARC1Q5VT66 337 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF691Q5VV52 312 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 SULT1C3Q6IMI6 304 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 MZT2BQ6NZ67 158 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 PLEKHG7Q6ZR37 379 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RNF165Q6ZSG1 346 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 SLC16A12Q6ZSM3 486 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 TUBA1AQ71U36 451 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RPS27LQ71UM5 84 aaKnown RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 KDELC2Q7Z4H8 507 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 CTU1Q7Z7A3 348 aaKnown RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 P2RY8Q86VZ1 359 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 METTL23Q86XA0 190 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ARMC8Q8IUR7 673 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 KIAA2013Q8IYS2 634 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 LGI2Q8N0V4 545 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 UMODL1-AS1Q8N2C9 162 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RYBPQ8N488 228 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 OR6Q1Q8NGQ2 317 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 OR13J1Q8NGT2 312 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ANKRD49Q8WVL7 239 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 C17orf50Q8WW18 174 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 TRIB2Q92519 343 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 FCGR1BQ92637 280 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 HTRA1Q92743 480 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 RORBQ92753 470 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 EXT2Q93063 718 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ISG20Q96AZ6 181 aaKnown RBP4.46□□□□□ -1.7
ATXN3-246ENST00000557030 PTERQ96BW5 349 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 C1orf74Q96LT6 269 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 PPP3R2Q96LZ3 170 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ATOH8Q96SQ7 321 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF382Q96SR6 550 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 GAD1Q99259 594 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 SEPHS2Q99611 448 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 PKMYT1Q99640 499 aa4.46□□□□□ -1.7
ATXN3-246ENST00000557030 HGH1Q9BTY7 390 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms