RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DLL4Q9NR61 685 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 BCAP29Q9UHQ4 241 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 FAM187AA6NFU0 413 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 CLCA1A8K7I4 914 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 H0YIV9 168 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 NME6O75414 186 aaPredicted RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 ERAL1O75616 437 aaKnown RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 C2P06681 752 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 EPXP11678 715 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 GPX3P22352 226 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 CTSSP25774 331 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 PTPN6P29350 595 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 STX2P32856 288 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 FEN1P39748 380 aaKnown RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 MAGEA4P43358 317 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 CPA2P48052 419 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 TMED10P49755 219 aaKnown RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 XKP51811 444 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 PCDH1Q08174 1060 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 ILF2Q12905 390 aaKnown RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 BIKQ13323 160 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 PTGR2Q8N8N7 351 aaPredicted RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 OR4K14Q8NGD5 310 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 OR1J4Q8NGS1 313 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 PHF21BQ96EK2 531 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 TUBA1CQ9BQE3 449 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 VPS11Q9H270 941 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 KLRF1Q9NZS2 232 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 ZNF629Q9UEG4 869 aaPredicted RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 PYCARDQ9ULZ3 195 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 RPH3AQ9Y2J0 694 aaPredicted RBP13.48□□□□□ -0.25
CHD8-211ENST00000556833 PCDHGB3Q9Y5G1 929 aa13.48□□□□□ -0.25
CHD8-211ENST00000556833 A0A087X1B8 175 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 A0A096LPK6 155 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 A0A1W2PPR1 153 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 ANKRD33BA6NCL7 494 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 H0Y3Z8 333 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 OR7A17O14581 309 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 SNX4O95219 450 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 ABCB1P08183 1280 aaPredicted RBP13.47□□□□□ -0.25
CHD8-211ENST00000556833 CYP4B1P13584 511 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 CPMP14384 443 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 CPOXP36551 454 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 STARP49675 285 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 CCNG1P51959 295 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 ALDH18A1P54886 795 aaKnown RBP13.47□□□□□ -0.25
CHD8-211ENST00000556833 DUSP2Q05923 314 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 LTBQ06643 244 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 FUT7Q11130 342 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 CUL3Q13618 768 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 RCAN2Q14206 197 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 LTB4RQ15722 352 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 FAM83EQ2M2I3 478 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 FBXL19-AS1Q494R0 122 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 TIGD3Q6B0B8 471 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 KIF18BQ86Y91 864 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 PLD6Q8N2A8 252 aaKnown RBP13.47□□□□□ -0.25
CHD8-211ENST00000556833 C7orf57Q8NEG2 295 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 OR14L1PQ8NHC6 308 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 TP53INP1Q96A56 240 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 INTS12Q96CB8 462 aaKnown RBP13.47□□□□□ -0.25
CHD8-211ENST00000556833 OMA1Q96E52 524 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 RBM24Q9BX46 236 aaKnown RBP13.47□□□□□ -0.25
CHD8-211ENST00000556833 OSBPL11Q9BXB4 747 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 ANKRA2Q9H9E1 313 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 EDARQ9UNE0 448 aa13.47□□□□□ -0.25
CHD8-211ENST00000556833 NSD1Q96L73 2696 aaPredicted RBP13.47□□□□□ -0.25
CHD8-211ENST00000556833 ESYT3A0FGR9 886 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 HMX2A2RU54 273 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 MBD3L4A6NDZ8 208 aaPredicted RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 MBD3L3A6NE82 208 aaPredicted RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 MBD3L5A6NJ08 208 aaPredicted RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 C17orf51A8MQB3 221 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 ERN1O75460 977 aaKnown RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 PPM1BO75688 479 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 CLDN9O95484 217 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 GSTA2P09210 222 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 TSPAN8P19075 237 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 PEX19P40855 299 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 ALDH9A1P49189 494 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 DCAF7P61962 342 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 RPP38P78345 283 aaKnown RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 PLCXD2Q0VAA5 305 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 DAZAP2Q15038 168 aaPredicted RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 PCBP2Q15366 365 aaKnown RBP eCLIP13.46□□□□□ -0.255e-7■■■■■ 49.9
CHD8-211ENST00000556833 CCNYL2Q5T2Q4 361 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 ZDHHC24Q6UX98 284 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 SPATA4Q8NEY3 305 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 MBD3L2Q8NHZ7 208 aaPredicted RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 TMEM41AQ96HV5 264 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 HBEGFQ99075 208 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 SERPINI1Q99574 410 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 PLEKHF2Q9H8W4 249 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 FARSBQ9NSD9 589 aaKnown RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 FOXD3Q9UJU5 478 aaPredicted RBP13.46□□□□□ -0.25
CHD8-211ENST00000556833 PLLPQ9Y342 182 aa13.46□□□□□ -0.25
CHD8-211ENST00000556833 A0A1B0GTL3 188 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms