RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZFP37Q9Y6Q3 630 aaPredicted RBP2.17□□□□□ -2.06
SNX6-204ENST00000555541 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 EMC8O43402 210 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 NUDT17P0C025 328 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 PSMB1P20618 241 aaKnown RBP2.16□□□□□ -2.06
SNX6-204ENST00000555541 TRIM23P36406 574 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 OR1D4P47884 311 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 KCNK10P57789 538 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 GIT2Q14161 759 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 CD226Q15762 336 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 CD164L2Q6UWJ8 174 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 LUZP1Q86V48 1076 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 MKXQ8IYA7 352 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 LINC00518Q8N0U6 118 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 OR6M1Q8NGM8 313 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 OR4L1Q8NH43 312 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 PANX3Q96QZ0 392 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 THUMPD3Q9BV44 507 aaKnown RBP2.16□□□□□ -2.06
SNX6-204ENST00000555541 TMEM206Q9H813 350 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 KCNMB3Q9NPA1 279 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 CENPMQ9NSP4 180 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 EXOC7Q9UPT5 735 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 FLVCR1Q9Y5Y0 555 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 MYO10Q9HD67 2058 aa2.16□□□□□ -2.06
SNX6-204ENST00000555541 YJEFN3A6XGL0 299 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 SLU7O95391 586 aaKnown RBP2.15□□□□□ -2.07
SNX6-204ENST00000555541 IGHV3-23P01764 117 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 ALPIP09923 528 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 SCG2P13521 617 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 B4GALT1P15291 398 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 RPA1P27694 616 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 ALDH3B2P48448 385 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 VCPP55072 806 aaKnown RBP2.15□□□□□ -2.07
SNX6-204ENST00000555541 DIO3P55073 304 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 ZNF85Q03923 595 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 KLF5Q13887 457 aaPredicted RBP2.15□□□□□ -2.07
SNX6-204ENST00000555541 IL17AQ16552 155 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 MPPE1Q53F39 396 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 TUSC5Q8IXB3 177 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 HAS2Q92819 552 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 AP2M1Q96CW1 435 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 COG3Q96JB2 828 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 CXorf58Q96LI9 332 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 CITED2Q99967 270 aaPredicted RBP2.15□□□□□ -2.07
SNX6-204ENST00000555541 NTMT1Q9BV86 223 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 SCRT1Q9BWW7 348 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 ELOVL4Q9GZR5 314 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 SLC26A1Q9H2B4 701 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 DCTPP1Q9H773 170 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 ESM1Q9NQ30 184 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 DNAJC17Q9NVM6 304 aaKnown RBP2.15□□□□□ -2.07
SNX6-204ENST00000555541 SEPT10Q9P0V9 454 aa2.15□□□□□ -2.07
SNX6-204ENST00000555541 DIMT1Q9UNQ2 313 aaKnown RBP2.15□□□□□ -2.07
SNX6-204ENST00000555541 TRIM49D1C9J1S8 452 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 CYB561D2O14569 222 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 TTI1O43156 1089 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 TYROBPO43914 113 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 TBCAO75347 108 aaKnown RBP2.14□□□□□ -2.07
SNX6-204ENST00000555541 PDE5AO76074 875 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 HSPA4LO95757 839 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 GAS8O95995 478 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 CHRNGP07510 517 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 CPA3P15088 417 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 CYP3A5P20815 502 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 SAA4P35542 130 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 TRADDQ15628 312 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 STX1AQ16623 288 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 GLYR1Q49A26 553 aaPredicted RBP2.14□□□□□ -2.07
SNX6-204ENST00000555541 CCDC14Q49A88 953 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 NHSL2Q5HYW2 709 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 SHQ1Q6PI26 577 aaKnown RBP2.14□□□□□ -2.07
SNX6-204ENST00000555541 TFAP2EQ6VUC0 442 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 ERICH1Q86X53 443 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 TMEM126BQ8IUX1 230 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 ERI1Q8IV48 349 aaKnown RBP2.14□□□□□ -2.07
SNX6-204ENST00000555541 RDH11Q8TC12 318 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 UBTD2Q8WUN7 234 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 GLYATL1Q969I3 302 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 ERP27Q96DN0 273 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 CCDC114Q96M63 670 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 CPXM1Q96SM3 734 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 DPH7Q9BTV6 452 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 OPN3Q9H1Y3 402 aaPredicted RBP2.14□□□□□ -2.07
SNX6-204ENST00000555541 DNAJB9Q9UBS3 223 aa2.14□□□□□ -2.07
SNX6-204ENST00000555541 RPH3AQ9Y2J0 694 aaPredicted RBP2.14□□□□□ -2.07
SNX6-204ENST00000555541 MAGEB4O15481 346 aaPredicted RBP2.13□□□□□ -2.07
SNX6-204ENST00000555541 LCMT2O60294 686 aaKnown RBP2.13□□□□□ -2.07
SNX6-204ENST00000555541 RTN2O75298 545 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 CRCPO75575 148 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 IGHV1-2P23083 117 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 HAND2P61296 217 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 RPS4XP62701 263 aaKnown RBP2.13□□□□□ -2.07
SNX6-204ENST00000555541 RPS6KA1Q15418 735 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 SGCBQ16585 318 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 KYAT1Q16773 422 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 SHROOM1Q2M3G4 852 aaPredicted RBP2.13□□□□□ -2.07
SNX6-204ENST00000555541 SBK1Q52WX2 424 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 ZNF789Q5FWF6 425 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 RTL6Q6ICC9 239 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 MOB1BQ7L9L4 216 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms