RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SGO1Q5FBB7 561 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 ATAD3BQ5T9A4 648 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 CPTPQ5TA50 214 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 RNLSQ5VYX0 342 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 TRIM40Q6P9F5 258 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 SLC46A3Q7Z3Q1 461 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 ABI3BPQ7Z7G0 1075 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 PTOV1Q86YD1 416 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 SLC44A2Q8IWA5 706 aaPredicted RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 DNAJC22Q8N4W6 341 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 WDR20Q8TBZ3 569 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 LKAAEAR1Q8TD35 194 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 SSC4DQ8WTU2 575 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 KLK6Q92876 244 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 SCAMP4Q969E2 229 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 UBE2E3Q969T4 207 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 Q96MT0 163 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 TSSK3Q96PN8 268 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 HBEGFQ99075 208 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 CCDC3Q9BQI4 270 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 BOCQ9BWV1 1114 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 CDCA4Q9BXL8 241 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 STRADBQ9C0K7 418 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 ABCG8Q9H221 673 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 CHST8Q9H2A9 424 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 RUBCNLQ9H714 662 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 FZD3Q9NPG1 666 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 FARSBQ9NSD9 589 aaKnown RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 SEC14L4Q9UDX3 406 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 PISDQ9UG56 409 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 TMPRSS11EQ9UL52 423 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 ABCG2Q9UNQ0 655 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 PRSS21Q9Y6M0 314 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 ADGRG4Q8IZF6 3080 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 LRP4O75096 1905 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 NAV3Q8IVL0 2385 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 MED13LQ71F56 2210 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 HIVEP1P15822 2718 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 A0A075B6Q4 140 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 PRAMEF33A0A0G2JMD5 474 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 TMEM247A6NEH6 219 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 FADS2P1A8MWK0 482 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 H3BM21 787 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 PSMD11O00231 422 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 TSPAN6O43657 245 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 SGTAO43765 313 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 PRAMEF10O60809 474 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 PSIP1O75475 530 aaKnown RBP10.51□□□□□ -0.73
SRP54-205ENST00000554803 FADS2O95864 444 aaKnown RBP10.51□□□□□ -0.73
SRP54-205ENST00000554803 JMJD7P0C870 316 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 MYCLP1P12525 358 aaPredicted RBP10.51□□□□□ -0.73
SRP54-205ENST00000554803 PRKACGP22612 351 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 FMO3P31513 532 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 SOX11P35716 441 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 MASP1P48740 699 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 HMGA2P52926 109 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 WNT3P56703 355 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 CLDN2P57739 230 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 VLDLRP98155 873 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 CHIT1Q13231 466 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 UGT8Q16880 541 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 ZNF284Q2VY69 593 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 GTDC1Q4AE62 458 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 HENMT1Q5T8I9 393 aaKnown RBP10.51□□□□□ -0.73
SRP54-205ENST00000554803 FHL5Q5TD97 284 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 MEDAGQ5VYS4 303 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 ZNF787Q6DD87 383 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 OR4F3Q6IEY1 312 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 ZNF621Q6ZSS3 439 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 SLC35F3Q8IY50 421 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 HS3ST5Q8IZT8 346 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 CLDN19Q8N6F1 224 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 NDNFQ8TB73 568 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 ZFP90Q8TF47 636 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 GEMIN6Q8WXD5 167 aaKnown RBP10.51□□□□□ -0.73
SRP54-205ENST00000554803 ASB12Q8WXK4 309 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 NUS1Q96E22 293 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 WDR34Q96EX3 536 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 DTD2Q96FN9 168 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 FOPNLQ96NB1 174 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 INPP5KQ9BT40 448 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 ZSCAN5AQ9BUG6 496 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 EFCAB11Q9BUY7 163 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 RIOK2Q9BVS4 552 aaKnown RBP10.51□□□□□ -0.73
SRP54-205ENST00000554803 SLC17A9Q9BYT1 436 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 C3orf14Q9HBI5 128 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 VNN3Q9NY84 501 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 TRAPPC4Q9Y296 219 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 GRIP1Q9Y3R0 1128 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 TESMINQ9Y4I5 508 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 PCDHGA6Q9Y5G7 932 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 DGKBQ9Y6T7 804 aa10.51□□□□□ -0.73
SRP54-205ENST00000554803 ARHGEF17Q96PE2 2063 aaPredicted RBP10.51□□□□□ -0.73
SRP54-205ENST00000554803 PCNX1Q96RV3 2341 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 C1orf226A1L170 272 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 HTR3EA5X5Y0 456 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 MGAT4DA6NG13 374 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms