RNA–Protein interactions for RNA: ENST00000553332.5

XRCC3-203, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-203ENST00000553332 EGLN2Q96KS0 407 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 BBS4Q96RK4 519 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 FAM173AQ9BQD7 235 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 DEFB127Q9H1M4 99 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 ANKRA2Q9H9E1 313 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 KCNK9Q9NPC2 374 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 MYNNQ9NPC7 610 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 MIEF1Q9NQG6 463 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 SLC35C2Q9NQQ7 365 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 C1orf109Q9NX04 203 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 ZNF639Q9UID6 485 aa13.23□□□□□ -0.29
XRCC3-203ENST00000553332 SPTBN1Q01082 2364 aaKnown RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 NCKAP5O14513 1909 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 WIPF3A6NGB9 483 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 PIP5K1BO14986 540 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 SLC19A2O60779 497 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 ERLIN1O75477 346 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 PDE9AO76083 593 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 MYZAPP0CAP1 466 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 TACR1P25103 407 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 SERPINB4P48594 390 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 PPIAP62937 165 aaKnown RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 KIAA0040Q15053 153 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 C3AR1Q16581 482 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 UGT3A2Q3SY77 523 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 CMPK2Q5EBM0 449 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 GK5Q6ZS86 529 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 SAMD14Q8IZD0 417 aaPredicted RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 GFM2Q969S9 779 aaKnown RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 CTHRC1Q96CG8 243 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 ITPAQ9BY32 194 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 TTTY12Q9BZ98 90 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 NXF5Q9H1B4 397 aaKnown RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 SSU72Q9NP77 194 aaKnown RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 TUBA8Q9NY65 449 aaPredicted RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 EHD3Q9NZN3 535 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 GIMAP2Q9UG22 337 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 ZDHHC2Q9UIJ5 367 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 TINAGQ9UJW2 476 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 EXO1Q9UQ84 846 aaKnown RBP13.22□□□□□ -0.29
XRCC3-203ENST00000553332 NPFFR2Q9Y5X5 522 aa13.22□□□□□ -0.29
XRCC3-203ENST00000553332 ZNF407Q9C0G0 2248 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 A0A1B0GTH9 108 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 ACOT7O00154 380 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CCL21O00585 134 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 LSM1O15116 133 aaKnown RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 ZG16O60844 167 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 NME6O75414 186 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 LYPLA1O75608 230 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 JUNP05412 331 aaKnown RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 NEFHP12036 1026 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 ABOP16442 354 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 SERPINB5P36952 375 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CA7P43166 264 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 NCBP2P52298 156 aaKnown RBP eCLIP13.21□□□□□ -0.297e-8■■■■■ 26.9
XRCC3-203ENST00000553332 CASP6P55212 293 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 PER3P56645 1201 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 NRG3P56975 720 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 FBXW4P57775 412 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 MPP2Q14168 576 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 NTRK2Q16620 822 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 RFTN2Q52LD8 501 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 TNFAIP8L3Q5GJ75 292 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CES4AQ5XG92 561 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 RNF165Q6ZSG1 346 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CROCCP2Q86T23 111 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 SPPL2CQ8IUH8 684 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 DND1Q8IYX4 353 aaKnown RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 FAM9CQ8IZT9 166 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 OR6Y1Q8NGX8 325 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CLHC1Q8NHS4 586 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 ZNF675Q8TD23 568 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 PAQR8Q8TEZ7 354 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 RELTQ969Z4 430 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 PGM2Q96G03 612 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 METTL2AQ96IZ6 378 aaKnown RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 SH2D2AQ9NP31 389 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 PRODH2Q9UF12 536 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 BAIAP2L1Q9UHR4 511 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CFL2Q9Y281 166 aa13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CHCHD2Q9Y6H1 151 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.21□□□□□ -0.29
XRCC3-203ENST00000553332 CAPN14A8MX76 684 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 MYO1GB0I1T2 1018 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 NPIPB8E9PQR5 432 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 TP53I11O14683 189 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 TM9SF1O15321 606 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 AKAP10O43572 662 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 ITM2AO43736 263 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 SKAP2O75563 359 aaPredicted RBP13.2□□□□□ -0.3
XRCC3-203ENST00000553332 HSPA4LO95757 839 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 SDC1P18827 310 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 ABCD3P28288 659 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 MPIP34949 423 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 EMDP50402 254 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 KCNJ2P63252 427 aa13.2□□□□□ -0.3
XRCC3-203ENST00000553332 CEBPEQ15744 281 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms