RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 LAMP1P11279 417 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 NR4A1P22736 598 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 CD1CP29017 333 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 ALDH4A1P30038 563 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 ETV6P41212 452 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 NCS1P62166 190 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 ZNF45Q02386 682 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 PRKCDQ05655 676 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 PAGE2BQ5JRK9 111 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 CCDC81Q6ZN84 652 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 FAM83HQ6ZRV2 1179 aaPredicted RBP13.7□□□□□ -0.22
LETMD1-235ENST00000552739 VRK3Q8IV63 474 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 SLITRK4Q8IW52 837 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 AMER2Q8N7J2 671 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 LINC00615Q96LM1 132 aaPredicted RBP13.7□□□□□ -0.22
LETMD1-235ENST00000552739 COL21A1Q96P44 957 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 DCSTAMPQ9H295 470 aa13.7□□□□□ -0.22
LETMD1-235ENST00000552739 DMXL2Q8TDJ6 3036 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 CCDC187A0A096LP49 1063 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 SH3D21A4FU49 640 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 AIREO43918 545 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 BRINP1O60477 761 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 MPZL2O60487 215 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 SNX4O95219 450 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 CATP04040 527 aaKnown RBP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 GABRB1P18505 474 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 PBLDP30039 288 aaPredicted RBP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 TIA1P31483 386 aaKnown RBP eCLIP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 LSSP48449 732 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 PRLHRP49683 370 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 GABREP78334 506 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 RAE1P78406 368 aaKnown RBP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 GPLD1P80108 840 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ZFP36L1Q07352 338 aaKnown RBP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 SQSTM1Q13501 440 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 PDE7AQ13946 482 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 DOC2AQ14183 400 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 IRF3Q14653 427 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 AMZ1Q400G9 498 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 IFI44LQ53G44 452 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 XKR6Q5GH73 641 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 C3orf38Q5JPI3 329 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 IGF2-ASQ6U949 168 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 AHSA2Q719I0 299 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ZBTB46Q86UZ6 589 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ARMC8Q8IUR7 673 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 CLECL1Q8IZS7 167 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 CADM3Q8N126 398 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 OR52N2Q8NGI0 321 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 SH3KBP1Q96B97 665 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 MTERF3Q96E29 417 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 SLC38A3Q99624 504 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 EBPLQ9BY08 206 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ARMC7Q9H6L4 198 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 CNOT2Q9NZN8 540 aaKnown RBP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ZNF624Q9P2J8 865 aaPredicted RBP13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ANKMY1Q9P2S6 941 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 SATB2Q9UPW6 733 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 ERVK-11Q9UQG0 969 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 TSC22D4Q9Y3Q8 395 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 PCDHGA4Q9Y5G9 962 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 KLK4Q9Y5K2 254 aa13.69□□□□□ -0.22
LETMD1-235ENST00000552739 LILRA5A6NI73 299 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 AGAP5A6NIR3 686 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 ARHGEF33A8MVX0 844 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 FOXE1O00358 373 aaPredicted RBP13.68□□□□□ -0.22
LETMD1-235ENST00000552739 ZZEF1O43149 2961 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 COQ9O75208 318 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 TNFRSF21O75509 655 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 DXOO77932 396 aaKnown RBP13.68□□□□□ -0.22
LETMD1-235ENST00000552739 CPSF4O95639 269 aaKnown RBP13.68□□□□□ -0.22
LETMD1-235ENST00000552739 PTTG1O95997 202 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 IFNA14P01570 189 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 EPHA2P29317 976 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 RRM2P31350 389 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 CSF2RBP32927 897 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 ALDH9A1P49189 494 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
LETMD1-235ENST00000552739 HMGA2P52926 109 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 EPHA4P54764 986 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.68□□□□□ -0.22
LETMD1-235ENST00000552739 NFE2L1Q14494 772 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 SMN1Q16637 294 aaKnown RBP13.68□□□□□ -0.22
LETMD1-235ENST00000552739 ZNF367Q7RTV3 350 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 GALNT6Q8NCL4 622 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 OR10Q1Q8NGQ4 319 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 OR2L2Q8NH16 312 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.68□□□□□ -0.221e-7■■■■■ 28.3
LETMD1-235ENST00000552739 SKA2Q8WVK7 121 aaPredicted RBP13.68□□□□□ -0.22
LETMD1-235ENST00000552739 ELMO1Q92556 727 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 PYCR2Q96C36 320 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 NUDT22Q9BRQ3 303 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 STRADBQ9C0K7 418 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 RACGAP1Q9H0H5 632 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 EHD1Q9H4M9 534 aa13.68□□□□□ -0.22
LETMD1-235ENST00000552739 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms