RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 POU2F1P14859 743 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 HIST1H2ADP20671 130 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 HOXA5P20719 270 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 SERPINB3P29508 390 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 IDUAP35475 653 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 UGT2B10P36537 528 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 ACVR1BP36896 505 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 KCNJ5P48544 419 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 STARP49675 285 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 RGS4P49798 205 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 LIM2P55344 173 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 FBXW4P57775 412 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 RPS4XP62701 263 aaKnown RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 BASP1P80723 227 aaKnown RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 GAB1Q13480 694 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 SNX1Q13596 522 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 THOC5Q13769 683 aaKnown RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 SERTAD2Q14140 314 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 RCN2Q14257 317 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 EFTUD2Q15029 972 aaKnown RBP eCLIP4.86□□□□□ -1.631e-6■■□□□ 12.1
HOXB3-213ENST00000552000 OASLQ15646 514 aaKnown RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 NTRK2Q16620 822 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 BEX5Q5H9J7 111 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 C6orf52Q5T4I8 152 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 UGT3A1Q6NUS8 523 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 CASC4Q6P4E1 433 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF474Q6S9Z5 364 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 NXPE4Q6UWF7 544 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 C22orf34Q6ZV56 151 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 ADGRE4PQ86SQ3 457 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 CAND1Q86VP6 1230 aaKnown RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 GRAMD2AQ8IUY3 354 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 OR4N5Q8IXE1 308 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 DND1Q8IYX4 353 aaKnown RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 MYO1HQ8N1T3 1032 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 CCDC89Q8N998 374 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 CNEP1R1Q8N9A8 125 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 FAM83FQ8NEG4 500 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 C1orf54Q8WWF1 131 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 ATL1Q8WXF7 558 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 ROBO4Q8WZ75 1007 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 UCN3Q969E3 161 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 MS4A6EQ96DS6 147 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 HIST1H2AHQ96KK5 128 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 RILPQ96NA2 401 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 HIST1H2AJQ99878 128 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 H2AFJQ9BTM1 129 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 ANGPTL4Q9BY76 406 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 SLCO5A1Q9H2Y9 848 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 COPS7BQ9H9Q2 264 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 TEX10Q9NXF1 929 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 PAK5Q9P286 719 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 CLCF1Q9UBD9 225 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 DAPP1Q9UN19 280 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 PACSIN2Q9UNF0 486 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 MAPRE3Q9UPY8 281 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 A0A088AWK7 358 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 TCRBV7S3A2A0A539 114 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 LRIT2A6NDA9 550 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 PABPN1LA6NDY0 278 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 HMGB1P1B2RPK0 211 aaPredicted RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 PLOD2O00469 737 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 TP53I11O14683 189 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 LIASO43766 372 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 FGF17O60258 216 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 HAUS5O94927 633 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SNX4O95219 450 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 TGM6O95932 706 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ACTL6AO96019 429 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 THBDP07204 575 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 CPN1P15169 458 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 PAMP19021 973 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF10P21506 573 aaPredicted RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 PTPN6P29350 595 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 GCKP35557 465 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 CDKN1AP38936 164 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SLC1A2P43004 574 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 TERF1P54274 439 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 MTTPP55157 894 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 EEF1A1P68104 462 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SIRPAP78324 504 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 TIAL1Q01085 375 aaKnown RBP eCLIP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ID3Q02535 119 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 GPS1Q13098 491 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 DHX34Q14147 1143 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF267Q14586 743 aaPredicted RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 RPS6KA2Q15349 733 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ETFDHQ16134 617 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 KCTD19Q17RG1 926 aaPredicted RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 KBTBD12Q3ZCT8 623 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 C4orf46Q504U0 113 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 EEF1A1P5Q5VTE0 462 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 LRRC8EQ6NSJ5 796 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 CAVIN1Q6NZI2 390 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ABHD17CQ6PCB6 329 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 PAQR3Q6TCH7 311 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SBSNQ6UWP8 590 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 DGAT2L6Q6ZPD8 337 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms