RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MCM8Q9UJA3 840 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 CES1P1Q9UKY3 287 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 FAM215AQ9Y5M1 114 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 LIPGQ9Y5X9 500 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 LRRC3CA6NJW4 275 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 MANBAO00462 879 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ERAL1O75616 437 aaKnown RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ESRRBO95718 433 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 HPNP05981 417 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ENO1P06733 434 aaKnown RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ABCB1P08183 1280 aaPredicted RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 SBK3P0C264 359 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 S1PR1P21453 382 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 DRD5P21918 477 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 GDF1P27539 372 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ABCD3P28288 659 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 HMOX2P30519 316 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 CASP3P42574 277 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 PKNOX1P55347 436 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 FBXW4P57775 412 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 PRICKLE4Q2TBC4 344 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 SPIN4Q56A73 249 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF678Q5SXM1 525 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 RTL6Q6ICC9 239 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 SLC30A6Q6NXT4 461 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 CCDC71Q8IV32 467 aaPredicted RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 EIF1ADQ8N9N8 165 aaKnown RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 UHMK1Q8TAS1 419 aaKnown RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 DOK4Q8TEW6 326 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 UCN3Q969E3 161 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 CTHRC1Q96CG8 243 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 KLHL29Q96CT2 875 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 TMEM41AQ96HV5 264 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 LCORQ96JN0 433 aaPredicted RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 RILPQ96NA2 401 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF559Q9BR84 538 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 UCK2Q9BZX2 261 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 BRINP2Q9C0B6 783 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 PPCSQ9HAB8 311 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 TMEM216Q9P0N5 145 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 BCAP29Q9UHQ4 241 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF639Q9UID6 485 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 UTS2RQ9UKP6 389 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 WBP11Q9Y2W2 641 aaKnown RBP9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 APCP25054 2843 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 DNAJC13O75165 2243 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF407Q9C0G0 2248 aa9.98□□□□□ -0.81
VTI1BP3-201ENST00000550220 CSMD1Q96PZ7 3565 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 C15orf38-AP3S2A0A0A6YYH1 394 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 A0A0G2JNJ9 132 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 GNG14A0A1W2PPG7 69 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 SERTM1A2A2V5 107 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 NKX2-6A6NCS4 301 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 PPP6CO00743 305 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 DVL2O14641 736 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 RIPK2O43353 540 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 DLX3O60479 287 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 PPM1BO75688 479 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 OR4F21O95013 312 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 EPPINO95925 133 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 CT62P0C5K7 136 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 RHOXF2BP0C7M4 288 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 GPX3P22352 226 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 TIMP3P35625 211 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 FEN1P39748 380 aaKnown RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 PPICP45877 212 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 ALDH9A1P49189 494 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 CDK9P50750 372 aaKnown RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 ACSM2AQ08AH3 577 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 MGAT2Q10469 447 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 LCP2Q13094 533 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 DUSP8Q13202 625 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 UNC50Q53HI1 259 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 NHSL2Q5HYW2 709 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 UBAP2Q5T6F2 1119 aaKnown RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 ACSM2BQ68CK6 577 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 TIGD3Q6B0B8 471 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 GALNT18Q6P9A2 607 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 ULK2Q8IYT8 1036 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 RPRMLQ8N4K4 120 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 C1orf52Q8N6N3 182 aaKnown RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 CDYL2Q8N8U2 506 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 OR1J4Q8NGS1 313 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF675Q8TD23 568 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 TMCO6Q96DC7 493 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 L3HYPDHQ96EM0 354 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 STMN4Q9H169 189 aaPredicted RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 UBQLN3Q9H347 655 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 METTL7AQ9H8H3 244 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 FARSBQ9NSD9 589 aaKnown RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 SIRT5Q9NXA8 310 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 MAT2BQ9NZL9 334 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 EHD3Q9NZN3 535 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 PSMC3IPQ9P2W1 217 aaPredicted RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 SPRR3Q9UBC9 169 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF629Q9UEG4 869 aaPredicted RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 Q9UFV3 132 aa9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 FOXD3Q9UJU5 478 aaPredicted RBP9.97□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF225Q9UK10 706 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms