RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 MASP1P48740 699 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 NRG3P56975 720 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 RAB10P61026 200 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 DR1Q01658 176 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 SETDB1Q15047 1291 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 TOMM20Q15388 145 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 DCST1Q5T197 706 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 HLA-DQA1Q5Y7H0 255 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 SLC30A6Q6NXT4 461 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 SCIMPQ6UWF3 145 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 NUP54Q7Z3B4 507 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 P3H2Q8IVL5 708 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 SLC35F6Q8N357 371 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 RNF175Q8N4F7 328 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 FAM83FQ8NEG4 500 aaPredicted RBP8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 OR7G1Q8NGA0 311 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 OR1J4Q8NGS1 313 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 UBTD2Q8WUN7 234 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 SLC44A1Q8WWI5 657 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 UCN3Q969E3 161 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 ATOH8Q96SQ7 321 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 MTERF1Q99551 399 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 RBBP8Q99708 897 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 CPNE1Q99829 537 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 TUBA1CQ9BQE3 449 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 BDH2Q9BUT1 245 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 OR10A5Q9H207 317 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 ACBD3Q9H3P7 528 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 NMRAL1Q9HBL8 299 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 GALNT8Q9NY28 637 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 NUDT4Q9NZJ9 180 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 OPTCQ9UBM4 332 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 EXO1Q9UQ84 846 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 EIF3LQ9Y262 564 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 FBN3Q75N90 2809 aa8.97□□□□□ -0.97
TRAFD1-207ENST00000550051 MED12Q93074 2177 aa8.96□□□□□ -0.97
TRAFD1-207ENST00000550051 CCDC189A1A4V9 331 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 FOXE1O00358 373 aaPredicted RBP8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 UGDHO60701 494 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 SMPD2O60906 423 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 ICOSLGO75144 302 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 PPM1BO75688 479 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 PIAS1O75925 651 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 NR2F6P10588 404 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 MTHFD2P13995 350 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 TCP1P17987 556 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 CHMP24386 653 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 ABCD3P28288 659 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 SSTR1P30872 391 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 GCKP35557 465 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 GP5P40197 560 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 DIO3P55073 304 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 RPS13P62277 151 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 MAP4K2Q12851 820 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 POU4F3Q15319 338 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 OR52E8Q6IFG1 317 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 CYP20A1Q6UW02 462 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 ENPP6Q6UWR7 440 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 YRDCQ86U90 279 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 TRIM42Q8IWZ5 723 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 CIARTQ8N365 385 aaPredicted RBP8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 SIMC1Q8NDZ2 872 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 OR4K14Q8NGD5 310 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 PYROXD1Q8WU10 500 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 ZNF592Q92610 1267 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 CDKL2Q92772 493 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 CTHRC1Q96CG8 243 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 ALG9Q9H6U8 611 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 TXNDC16Q9P2K2 825 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 MRPS18CQ9Y3D5 142 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 RTTNQ86VV8 2226 aa8.96□□□□□ -0.98
TRAFD1-207ENST00000550051 DSCAMO60469 2012 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 HEATR5AQ86XA9 2040 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 FAM159BA6NKW6 160 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 POM121CA8CG34 1229 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 KIAA1324LA8MWY0 1029 aaPredicted RBP8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 GNB5O14775 395 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 MSTNO14793 375 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 CTIFO43310 598 aaKnown RBP8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 KERAO60938 352 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 TNFSF13O75888 250 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 AIFM1O95831 613 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 CRHP06850 196 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 CT62P0C5K7 136 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 FPR1P21462 350 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 PIK3R1P27986 724 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 CRABP2P29373 138 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 SPRP35270 261 aaPredicted RBP8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 PTGDSP41222 190 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 MC3RP41968 323 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 XKP51811 444 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 GFRA1P56159 465 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 DLG1Q12959 904 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 DDX39BQ13838 428 aaKnown RBP8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 ACKR1Q16570 336 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 Q5PR19 223 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 GRTP1Q5TC63 336 aa8.95□□□□□ -0.98
TRAFD1-207ENST00000550051 ANGPTL8Q6UXH0 198 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms