RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
LETMD1-220ENST00000549686 ACTRT3Q9BYD9 372 aa16.24■□□□□ 0.19
LETMD1-220ENST00000549686 TMEM38AQ9H6F2 299 aa16.24■□□□□ 0.19
LETMD1-220ENST00000549686 AKIRIN1Q9H9L7 192 aaPredicted RBP16.24■□□□□ 0.19
LETMD1-220ENST00000549686 PNO1Q9NRX1 252 aaKnown RBP16.24■□□□□ 0.19
LETMD1-220ENST00000549686 THSD1Q9NS62 852 aa16.24■□□□□ 0.19
LETMD1-220ENST00000549686 GPATCH2Q9NW75 528 aa16.24■□□□□ 0.19
LETMD1-220ENST00000549686 CFL2Q9Y281 166 aa16.24■□□□□ 0.19
LETMD1-220ENST00000549686 PTRH2Q9Y3E5 179 aaKnown RBP16.24■□□□□ 0.19
LETMD1-220ENST00000549686 CEP250Q9BV73 2442 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 TEX51A0A1B0GUA7 166 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 ELOVL7A1L3X0 281 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 DCDC2BA2VCK2 349 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 OR2W5A6NFC9 320 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 ANKRD65E5RJM6 399 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 KLF7O75840 302 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 HMGN2P05204 90 aaKnown RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 TCN2P20062 427 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 MATN1P21941 496 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 STAT5AP42229 794 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 GZMMP51124 257 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 PRKAG1P54619 331 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 DSTNP60981 165 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 GNA13Q14344 377 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 ZNF267Q14586 743 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 TRMT12Q53H54 448 aaKnown RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 GCNT6Q5T4J0 391 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 MFSD12Q6NUT3 480 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 SHISA6Q6ZSJ9 500 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 ANKRD37Q7Z713 158 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 CLEC4FQ8N1N0 589 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 METTL25Q8N6Q8 603 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 RNF148Q8N7C7 305 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 ENDOVQ8N8Q3 282 aaKnown RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 CDRT4Q8N9R6 151 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 PNPT1Q8TCS8 783 aaKnown RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 CT55Q8WUE5 264 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 PTPMT1Q8WUK0 201 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 VPS50Q96JG6 964 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 TRIM8Q9BZR9 551 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 TRIM15Q9C019 465 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 GIN1Q9NXP7 522 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 PRODH2Q9UF12 536 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 MAGEL2Q9UJ55 1249 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 FARSAQ9Y285 508 aaKnown RBP16.23■□□□□ 0.19
LETMD1-220ENST00000549686 ZNF451Q9Y4E5 1061 aa16.23■□□□□ 0.19
LETMD1-220ENST00000549686 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 LOC102723996A0A087X1L8 192 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 MYOCOSA0A1B0GUC4 107 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 TMEM247A6NEH6 219 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 TNFRSF21O75509 655 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CBX7O95931 251 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CT62P0C5K7 136 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 S1PR1P21453 382 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 PTGER1P34995 402 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 SOX18P35713 384 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CORO7P57737 925 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 DMTNQ08495 405 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 DNASE1L3Q13609 305 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 VEZF1Q14119 521 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 LASP1Q14847 261 aaKnown RBP16.22■□□□□ 0.19
LETMD1-220ENST00000549686 ZNF630Q2M218 657 aaPredicted RBP16.22■□□□□ 0.19
LETMD1-220ENST00000549686 C1orf146Q5VVC0 180 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CDC73Q6P1J9 531 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 DGAT2L6Q6ZPD8 337 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CPEB2Q7Z5Q1 589 aaKnown RBP16.22■□□□□ 0.19
LETMD1-220ENST00000549686 IFNEQ86WN2 208 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 PROSER1Q86XN7 944 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 C10orf67Q8IYJ2 551 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 MICU2Q8IYU8 434 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 LGI4Q8N135 537 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 C11orf65Q8NCR3 313 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 OR52R1Q8NGF1 315 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 POP5Q969H6 163 aaKnown RBP16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CCDC124Q96CT7 223 aaKnown RBP16.22■□□□□ 0.19
LETMD1-220ENST00000549686 NXPE2Q96DL1 559 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 GIMAP5Q96F15 307 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 SENP5Q96HI0 755 aaPredicted RBP16.22■□□□□ 0.19
LETMD1-220ENST00000549686 LPAR4Q99677 370 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CNPPD1Q9BV87 410 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 ASCL3Q9NQ33 180 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 COPS7AQ9UBW8 275 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 KCND3Q9UK17 655 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 POMPQ9Y244 141 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 PCDHGB3Q9Y5G1 929 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 SNX13Q9Y5W8 968 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 CNOT1A5YKK6 2376 aaKnown RBP16.22■□□□□ 0.19
LETMD1-220ENST00000549686 KIF26BQ2KJY2 2108 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 NUP210LQ5VU65 1888 aa16.22■□□□□ 0.19
LETMD1-220ENST00000549686 A0A1W2PQ72 361 aa16.21■□□□□ 0.19
LETMD1-220ENST00000549686 OR6C76A6NM76 312 aa16.21■□□□□ 0.19
LETMD1-220ENST00000549686 ETFAP13804 333 aa16.21■□□□□ 0.19
LETMD1-220ENST00000549686 TCN1P20061 433 aaPredicted RBP16.21■□□□□ 0.19
LETMD1-220ENST00000549686 MMP11P24347 488 aa16.21■□□□□ 0.19
LETMD1-220ENST00000549686 PGDP52209 483 aa16.21■□□□□ 0.19
LETMD1-220ENST00000549686 EFNA3P52797 238 aa16.21■□□□□ 0.19
LETMD1-220ENST00000549686 PUM1Q14671 1186 aaKnown RBP eCLIP16.21■□□□□ 0.19
LETMD1-220ENST00000549686 ZNHIT3Q15649 155 aaPredicted RBP16.21■□□□□ 0.19
LETMD1-220ENST00000549686 VMACQ2NL98 169 aa16.21■□□□□ 0.19
LETMD1-220ENST00000549686 SFT2D3Q587I9 215 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms