RNA–Protein interactions for RNA: ENST00000548883.5

C12orf42-208, Transcript of chromosome 12 open reading frame 42, human

APPRIS P2 TSL 1 (best) BASIC

Gene C12orf42, Length 1,336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C12orf42-208	ENST00000548883	SLC24A3	Q9HC58	644 aa		18.72	■□□□□ 0.59
C12orf42-208	ENST00000548883	ALKBH4	Q9NXW9	302 aa		18.72	■□□□□ 0.59
C12orf42-208	ENST00000548883	MAT2B	Q9NZL9	334 aa		18.72	■□□□□ 0.59
C12orf42-208	ENST00000548883	TMEM216	Q9P0N5	145 aa		18.72	■□□□□ 0.59
C12orf42-208	ENST00000548883	VPS29	Q9UBQ0	182 aa		18.72	■□□□□ 0.59
C12orf42-208	ENST00000548883	NIN	Q8N4C6	2090 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	DCHS2	Q6V1P9	2916 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883		A0A0G2JNJ9	132 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	RIPK2	O43353	540 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	CDH16	O75309	829 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	ABCD3	P28288	659 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	HMOX2	P30519	316 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	MAP4K2	Q12851	820 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	GPRIN3	Q6ZVF9	776 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	SLC22A9	Q8IVM8	553 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	DMRTC2	Q8IXT2	367 aa	Predicted RBP	18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	PRR22	Q8IZ63	422 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	CLYBL	Q8N0X4	340 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	ANGPTL4	Q9BY76	406 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883		Q9UFV3	132 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	BCAP29	Q9UHQ4	241 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	MCM8	Q9UJA3	840 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	ZNF780B	Q9Y6R6	833 aa		18.71	■□□□□ 0.59
C12orf42-208	ENST00000548883	C15orf38-AP3S2	A0A0A6YYH1	394 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	MANBA	O00462	879 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	ESRRB	O95718	433 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	NAGA	P17050	411 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	S1PR1	P21453	382 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	ATP5F1	P24539	256 aa	Predicted RBP	18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	FEN1	P39748	380 aa	Known RBP	18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	TRPC1	P48995	793 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	ALDH9A1	P49189	494 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	KRTAP10-9	P60411	292 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	DUSP8	Q13202	625 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	UNC50	Q53HI1	259 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	TCHHL1	Q5QJ38	904 aa	Predicted RBP	18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	RIPPLY2	Q5TAB7	128 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	BICRAL	Q6AI39	1079 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	MMP21	Q8N119	569 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	ACMSD	Q8TDX5	336 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	HSPBAP1	Q96EW2	488 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	ITPA	Q9BY32	194 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	NXF5	Q9H1B4	397 aa	Known RBP	18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	FETUB	Q9UGM5	382 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	DTX4	Q9Y2E6	619 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	C15orf41	Q9Y2V0	281 aa		18.7	■□□□□ 0.58
C12orf42-208	ENST00000548883	OTOG	Q6ZRI0	2925 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	INTS1	Q8N201	2190 aa	Known RBP	18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	ACOX3	O15254	700 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	DLX3	O60479	287 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	ULK1	O75385	1050 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	PPM1B	O75688	479 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	TRAPPC6A	O75865	159 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	HPN	P05981	417 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	IMPDH1	P20839	514 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	ADH7	P40394	386 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	CASP3	P42574	277 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	MGAT2	Q10469	447 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	SLC25A35	Q3KQZ1	300 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	FAM111B	Q6SJ93	734 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	CDH24	Q86UP0	819 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	ULK2	Q8IYT8	1036 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	GBP7	Q8N8V2	638 aa	Predicted RBP	18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	METTL6	Q8TCB7	284 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	TMEM41A	Q96HV5	264 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	UBQLN3	Q9H347	655 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	PRODH2	Q9UF12	536 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	KCNN3	Q9UGI6	736 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	ZNF639	Q9UID6	485 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	UTS2R	Q9UKP6	389 aa		18.69	■□□□□ 0.58
C12orf42-208	ENST00000548883	CCDC151	A5D8V7	595 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	GSTA1	P08263	222 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	CDK9	P50750	372 aa	Known RBP	18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	DCAF7	P61962	342 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	PLCXD2	Q0VAA5	305 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	LCP2	Q13094	533 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	EXOSC7	Q15024	291 aa	Known RBP	18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	NNAT	Q16517	81 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	SPIN4	Q56A73	249 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	TMEM81	Q6P7N7	255 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	PM20D2	Q8IYS1	436 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	CTHRC1	Q96CG8	243 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	L3HYPDH	Q96EM0	354 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	CNRIP1	Q96F85	164 aa	Predicted RBP	18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	LCOR	Q96JN0	433 aa	Predicted RBP	18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	ZNF559	Q9BR84	538 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	METTL7A	Q9H8H3	244 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	PFDN4	Q9NQP4	134 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	PLLP	Q9Y342	182 aa		18.68	■□□□□ 0.58
C12orf42-208	ENST00000548883	FREM3	P0C091	2139 aa		18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	GNG14	A0A1W2PPG7	69 aa		18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	HSPB2	A8KAH6	182 aa		18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	GOLGA8R	I6L899	631 aa		18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	PCDH7	O60245	1069 aa		18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	CBX7	O95931	251 aa		18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	ENO1	P06733	434 aa	Known RBP	18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	ABCB1	P08183	1280 aa	Predicted RBP	18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	DRD2	P14416	443 aa		18.67	■□□□□ 0.58
C12orf42-208	ENST00000548883	PRKAA2	P54646	552 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms